| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4718 |
|---|
| Symbol | |
|---|
| ID | 4313610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1710128 |
|---|
| End bp | 1710955 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638152562 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_776602 |
|---|
| Protein GI | 115359464 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTATC TTCTCGGCTG CACGACAATC CGACCGTTCA TGACAACCGA AGACATCCAG
ACGAAACCCG GCGACTCCTA TGTGCAGTCG TTCGCGCGCG GCCTCGCGGT GATCCGCGCG
TTCGACGCCC AGCGCCCGGA GCAGACGCTC ACCGAGGTCG CCTCGGCCAC CGGGCTGACC
CGCGCGGGCG CGCGCCGGAT CCTGCTGACG CTGCAGACGC TCGGCTACGT CGAAGCGGAC
GGCCGGCTGT TCCGGCTCAC GCCGAAGATC CTCGAGCTCG GCTTCGCGTA TCTCACGTCG
ATGCCGTTCT GGAATCTCGC CGATCCGGTG ATGGAGCAAT TGTCCGCGCA GATCCACGAA
AGCTGCTCGG CCGCCGTGCT CGACCGCACC GAGATCGTCT ACGTGCTGCG CGTGCCGACC
CGCAAGATCA TGACGATCAA TCTGTCGATC GGCAGCCGCC TGCCCGCGTA CTGCACGTCG
ATGGGCCGCG TGCTGCTGTC CGCGCTCGAC GACGCGGCGC TCGACGAAAC GCTCGCGCAG
AGCAGCATTC GCGCGCATAC GCCCCGCACG ATCACCGACA TCGGCGAGCT GAAGGCGACG
ATCGCGCAGG CGCGCCAGCA AGGCTGGGCC GTGGTCGACC AGGAACTGGA AGTGGGCCTG
ATGTCGATTT CCGCGCCGAT CCGCAACCGG CGCGGGCAGG TGATCGCCGC GATGAACATC
AGCGGCAACG CGCAGCGGCA TACCGCGAAG CAGATGGTGA AGGAGTTTCT CGGGCCGCTG
CAGCAGGCCG CGCAGACGGT GTCGGAGCTG GTGGCACGGC GCGGGTAA
|
|---|
| Protein sequence | MRYLLGCTTI RPFMTTEDIQ TKPGDSYVQS FARGLAVIRA FDAQRPEQTL TEVASATGLT
RAGARRILLT LQTLGYVEAD GRLFRLTPKI LELGFAYLTS MPFWNLADPV MEQLSAQIHE
SCSAAVLDRT EIVYVLRVPT RKIMTINLSI GSRLPAYCTS MGRVLLSALD DAALDETLAQ
SSIRAHTPRT ITDIGELKAT IAQARQQGWA VVDQELEVGL MSISAPIRNR RGQVIAAMNI
SGNAQRHTAK QMVKEFLGPL QQAAQTVSEL VARRG
|
|---|
| |