Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4697 |
Symbol | |
ID | 4313589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1683321 |
End bp | 1684862 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152541 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_776581 |
Protein GI | 115359443 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.204697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.315368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACA TGTACAACTC GAATGGCCTG ATGCGCTTCG CGAAGGTGGC GGCCGCGAGC ACCCTGCTCG CGACGCTGCT CGCCGCGTGC GCGGTGGGCC CTGACTACAA GCGCCCGGAC GTGTCGACGC CCGCGGCGTT CAAGGAAGCG CCGACGCTCG CGGCCGGCGA ACAGGCCGGC ACGTGGAAGA CCGCCGAACC GGCGGACGGC GAGCATCGCG GCGAATGGTG GAAGGTGTTC GGCGATCCGG TGCTCGACTC GCTCGAGTCG CAGGCGCTCG CCGCGAACCA GAACCTGAAG GCCGCGGCGG CGCGCGTCGA GGAAGCGCGT GCGGCGACCC GCACCGCGCG CTCGCAGTGG TTCCCGCAGG TCGGCGCCGG GTTCGGGCCG ACGCGCCAGG GGCTGTCGTC GGCGTCGCAG CTCCAGCCGC AGGGCACGGG CCCGACCAAC GCGACGCTGT GGCGCGCACA GGGCACGGTG TCTTACGAGG CCGACCTGTT CGGCCGCGTG AGCCGCAACG TCGAGGCGTC GCGCGCCGAC CAGGCGCAGA GCGAAGCGCT GTTCCGCTCG GTGCAGCTCG CGCTGCAGGC GGACGTCGCG CAGAACTACT TCGAACTGCG CCAGCTCGAC TCGGACCAGG ACCTGTACCG CCGCACGGTC GAGCTGCGCG ACCAGGCGCT GAAGCTCGTG CAGCGTCGCT TCAACGAAGG CGACATCAGC GAGCTCGACG TGTCGCGCGC GAAGAACGAA CTGGCGACCG CGCAGGCCGA TGCGGTCGGC GTTGCGCGCC GGCGCGCGGC GTCCGAGCAT GCGCTCGCGA TCCTGCTCGG CAAGGCGCCC GCGGACTTCG CGTTCAAGGA AACGCCGATC GTGCCGGTCG CGGTGAAGGT TCCGGCGGGA CTGCCGTCCG CGCTGCTCGA ACGGCGTCCG GACGTGTCGG CGGCCGAGCG CGCGATGGCG GCGGCGAACG CGCGGATCGG CCTGGCGAAG TCGGCGTATT TCCCGAAGCT CGATATCACG GGCGCGTTCG GGTATGAGGC GTCGACGCTC GGCAACCTGT TCCTGTGGTC GAGCCGCACG TTCCTGCTCG GGCCGTTCGC CGGTACCGCG CTGACGCTGC CGCTGTTCGA CGGCGGGCGG CGTGCGGCCG GCGTGCAGCA GGCGCGCGCG CAGTACGACG AGCAGGTCGC GAACTACCGG CAGCAGGTGC TCGTCGCGTT CCGCGAGGTC GAGGACAACC TCGCCGATCT GCGTCTGCTC GACGACCAGA TTCGCGCGCA GGATGCGGCC GTCAACGCGT CGCGCCGTGC GGCGACGCTG TCGCGTACGC AGTATCAGGA AGGCGAAGTC GCCTATCTCG ACGTGATCGA CAGCGAGCGG TCGGTGCTGC AGTCGCAATT GCAGGCGAAC CAGTTGACCG GTGCGCAGGC GGTGTCGACC GTCAATCTGA TTCGCGCGCT GGGCGGCGGG TGGGGGAATG CACCGGCGCC GACGGCGGTG GGTGATGCGG CGACGGGCAA GGCGGACGTG GCGGCGCGCT GA
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Protein sequence | MDNMYNSNGL MRFAKVAAAS TLLATLLAAC AVGPDYKRPD VSTPAAFKEA PTLAAGEQAG TWKTAEPADG EHRGEWWKVF GDPVLDSLES QALAANQNLK AAAARVEEAR AATRTARSQW FPQVGAGFGP TRQGLSSASQ LQPQGTGPTN ATLWRAQGTV SYEADLFGRV SRNVEASRAD QAQSEALFRS VQLALQADVA QNYFELRQLD SDQDLYRRTV ELRDQALKLV QRRFNEGDIS ELDVSRAKNE LATAQADAVG VARRRAASEH ALAILLGKAP ADFAFKETPI VPVAVKVPAG LPSALLERRP DVSAAERAMA AANARIGLAK SAYFPKLDIT GAFGYEASTL GNLFLWSSRT FLLGPFAGTA LTLPLFDGGR RAAGVQQARA QYDEQVANYR QQVLVAFREV EDNLADLRLL DDQIRAQDAA VNASRRAATL SRTQYQEGEV AYLDVIDSER SVLQSQLQAN QLTGAQAVST VNLIRALGGG WGNAPAPTAV GDAATGKADV AAR
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