Gene Bamb_4694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4694 
Symbol 
ID4313586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1680767 
End bp1681618 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID638152538 
Productalpha/beta hydrolase fold 
Protein accessionYP_776578 
Protein GI115359440 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.165062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC GAATCGAGCC GTCGGTGCTC GCGAACCCGG ACCTGCAATT TGCGACGCTT 
TCGTCGGGCA TCAGCCTGCC GTATGTCGAG CGGGGCAGCG GCGCGCCGAT GGTGTTCGTG
CACGGATCGT TGTGCGACTA CCGCTACTGG GATCCGCAAC TCGCATCGCT GTCGGCACAT
TACCGCTGCA TCGCGCCGAG CCTGAGCCAC TACTGGCCGG CCGTCGAAGC GGGCATCCAG
GACGAGTTCA GCTGGCAGAA CCACGTCGAC GAGCTCGCCG AATTCATCGA CGCACTCGAT
CTCGGCCCCG TGCATCTCGT CGGGCATTCG CGTGGCGGCA GCGTCGCGTT CAACGTCGCG
CGCCAGCACC CGCACCTCGT CGAGTCGCTG ACGCTCGCCG ATCCGGGCGG TCCGCTGCAA
CAGCCGGGCG TGCGCGAAGC CGCGCTGCCG GCCGCCGCGA TCGCGCTGCG CACGAAGGCC
GTGAACCTGA TCGGTCAAGG TGAAGTGGAA GCCGGCCTCG AGATGTTCGT CGACTCGGTG
AGCCTGCCGG GCGCATGGAA GAAGAGCACG TCGCGCTTTC GCACGATGGC GATCGACAAC
GCGAGCACGC TGCCGAAGCA GCTGCGCGAT CCGCTGCCCG CGTATTCGCA GCATGCGGCG
TCGGATATCG CGTGCCGCAC GCTGCTGATC GACGGTCAGC GCAGCCCGAA GATGTTCCGC
AACAACGTCG ACACGCTGTC GCAGTGGATC GGCGATGCGC AACGGCAGAC CGTCGCCGGT
GCGTCGCACG GGATGAACGC GGCAAGCCCC GCGGTGTTCA ACCGTTTCGT GCACGAGTTC
GTCGCCGCGT AA
 
Protein sequence
MNMRIEPSVL ANPDLQFATL SSGISLPYVE RGSGAPMVFV HGSLCDYRYW DPQLASLSAH 
YRCIAPSLSH YWPAVEAGIQ DEFSWQNHVD ELAEFIDALD LGPVHLVGHS RGGSVAFNVA
RQHPHLVESL TLADPGGPLQ QPGVREAALP AAAIALRTKA VNLIGQGEVE AGLEMFVDSV
SLPGAWKKST SRFRTMAIDN ASTLPKQLRD PLPAYSQHAA SDIACRTLLI DGQRSPKMFR
NNVDTLSQWI GDAQRQTVAG ASHGMNAASP AVFNRFVHEF VAA