Gene Bamb_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4688 
Symbol 
ID4313580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1672673 
End bp1674091 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content68% 
IMG OID638152532 
Productflavin-dependent oxidoreductase 
Protein accessionYP_776572 
Protein GI115359434 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0991712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.791693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CGAACCGCAA GAAGATCCTG CTCAACGCGT TCAACATGAA CTGCGTCGGA 
CACATCAACC ACGGGCTGTG GACGCATCCG CGCGACCGCT CCGCGCACTA CACCGATCTC
GACTACTGGG CCGATCTCGC GAGGACGCTC GAGCGCGGCA AGTTCGACGG GATCTTTCTG
GCGGACATCG TCGGCGTGTA CGACGTGTTC GGCGGCGGCC CGGACGCCGC GCTGCGCGAA
TCGGTGCAGG TGCCCGTCAA CGATCCGCTG CTGCTCGTGC CCGCGATGGC GCAGGTCACG
CGGCATCTCG GCTTCGGCGT GACCGCGAAC CTGACCTACG AGCCGCCGTA CCTGTTCGCG
CGCCGCATGT CGACGCTCGA TCACCTGACG AAGGGGCGCA TCGGCTGGAA CATCGTGACC
GGCTATCTCG ACAGCGCCGC GCGCGGAATG GGCCTCGCGC AGCAGATCGG CCACGACGAC
CGCTACGAAC GCGCGGACGA CTACATGGAC GTCGTCTACA AGCTGTGGGA ACAAAGCTGG
GACGACGATG CGGTGATCCG CGACGCGCAG GCGCGCGTGT TCGCGCAGCC GGGCAAGGTG
CGGCGCGTCA AGCACGACGG GCCGTTCTAT TCGGTCGACG CGATCCACCT GAGCGAGCCG
TCGCTGCAGC GCACGCCGGT GCTGTACCAG GCCGGTTCGT CCGCGCGCGG CGTCGAGTTC
GCGGGGCGGC ACGCGGAGTG CGTGTTCGTG AACGGGCAGA GCAAGGCCGC CGCGCGCGCG
GCGGCGCTCG ATATCCGCGC GGCCGCCGCA CGGCAGGGCC GCGACCCGGC CTCGATCAGG
ATTTTCGCCG GCGTGAGCGT CGTGACCGCC GAGACCGAGC TTCTCGCCCG CGAGAAGTTC
GACGAATACC GGCGCTACGC GAGCCCCGAA GCCGGCCTCG CGCATTTCGC GAGTTCGACC
GGCATCGACT TCGCGAAGTA CGGGCTCGAC GAGCCGATCT CGTACGTGAA GACCGATTCG
ATCCAGTCGG CCGTCGACGC GATCTCGCGC AAGAGCACGA CCGGCACGTG GACCGTGCGC
CGGATGCTCG AACAGATGTC GCTCGGCGGG CGCTACGCGC CGATCGTCGG TTCGCCGTCG
CAGGTCGCGG ACGAACTGCA GTCGTGGATC GACGAGACCG GCATCGACGG TTTCAACCTG
ACGCGCACGG TGATGCCCGA GTCGTTCGAG GATTTCGTCG ACTGGGTCGT GCCTGAGCTG
CAGAACCGCG GCATCTACAA GGAAGACTAC GATCCCGCGC CGACGCTGCG CGAGAAGCTG
TTCGGCGGCG GCCCGCGGCT GCCGGCCTGG CATACGGGCG CGCGGCACCG GCTGGCCGCC
GCGCCAGCAT CGGAACCCGC GCATCCCGCG CATGCATGA
 
Protein sequence
MTTPNRKKIL LNAFNMNCVG HINHGLWTHP RDRSAHYTDL DYWADLARTL ERGKFDGIFL 
ADIVGVYDVF GGGPDAALRE SVQVPVNDPL LLVPAMAQVT RHLGFGVTAN LTYEPPYLFA
RRMSTLDHLT KGRIGWNIVT GYLDSAARGM GLAQQIGHDD RYERADDYMD VVYKLWEQSW
DDDAVIRDAQ ARVFAQPGKV RRVKHDGPFY SVDAIHLSEP SLQRTPVLYQ AGSSARGVEF
AGRHAECVFV NGQSKAAARA AALDIRAAAA RQGRDPASIR IFAGVSVVTA ETELLAREKF
DEYRRYASPE AGLAHFASST GIDFAKYGLD EPISYVKTDS IQSAVDAISR KSTTGTWTVR
RMLEQMSLGG RYAPIVGSPS QVADELQSWI DETGIDGFNL TRTVMPESFE DFVDWVVPEL
QNRGIYKEDY DPAPTLREKL FGGGPRLPAW HTGARHRLAA APASEPAHPA HA