Gene Bamb_4682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4682 
Symbol 
ID4313574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1666632 
End bp1667585 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content68% 
IMG OID638152526 
Productuncharacterized membrane-anchored protein 
Protein accessionYP_776566 
Protein GI115359428 
COG category[S] Function unknown 
COG ID[COG4714] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.530384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TCGCCGTCCG CGTCGCCTGC GTGGCGATGC TCGCATTCGC CGCGACCCGC 
GGCCACGCAC AAACCGAAGC CGCGCAGGTC GAAATGAGGG CCGCCGCCGC GGCCGCCAAC
AAGGCCGTCG TCAGCGGGCC GGCCGATATC GACATCAAGC ACGAAGCCGT GCTGAAGCTG
AAAGCGGGCG AATCGTTCGT GCCGGCCGCC GAAGCCGGCC GCTACCTGCG CTCGATGGGC
AACTCGATCG ACGAATCGAA GCTGGTCGGG CTCGTGCTGC CGGAGGATCC GGACGCCGAC
TGGATCTCGG TCGTGTCGTT CGAGCCGAGC GGCTATATCC GCGACGATGA CGCGAAGGAC
TGGAAACCCG ACGAATTGCT GAAGAGCCTG CAGGCCGGCA CCGAGGAGGG CAACCCGGCG
CGCAAAGAGC GCGGCCTGCC GGAAACCGAG GTGGCCGGCT GGGCGAAGGC GCCGGCATAC
GACGCGGCCA CGCACCGGCT CGTGTGGTCC GCGATCATCC GCGACAAGGG CGCGGCCGCG
AACGCGGAGA ACGACGGGGT GAACTACCGC ACGCTCGTGC TCGGCCGCGA CGGCTACCTG
TCGCTGACGA TGGCGTCGAC GCTCGCCGAT CTGCCGAAGT ACAAGCCCTC GGCCGACGAC
CTGCTCGCGA ACATCCGCTT CAACGACGGC AAGCGCTACG CCGATTTCAA CAAGTCGACC
GACCACGTCG CCGAGTACGG TCTCGCGGCG CTGATCGTCG GCGTCGGCGC GAAGAAGCTC
GGCCTGCTCG CGCTGATCGG CGCGTTCGCG CTGAAGTTCT TCAAGGTCGG CGCGATCGCG
CTGCTGGGGG GCGCGGCGGC GCTGAAGCGC TTCTTCGGCC GCAAGCCGAA GGCAGCCGCG
GTACCGGTCA TCGCCGAGGC GTCCGGCGTG CCGGAGACGG AGCGCAACGA ATGA
 
Protein sequence
MKKLAVRVAC VAMLAFAATR GHAQTEAAQV EMRAAAAAAN KAVVSGPADI DIKHEAVLKL 
KAGESFVPAA EAGRYLRSMG NSIDESKLVG LVLPEDPDAD WISVVSFEPS GYIRDDDAKD
WKPDELLKSL QAGTEEGNPA RKERGLPETE VAGWAKAPAY DAATHRLVWS AIIRDKGAAA
NAENDGVNYR TLVLGRDGYL SLTMASTLAD LPKYKPSADD LLANIRFNDG KRYADFNKST
DHVAEYGLAA LIVGVGAKKL GLLALIGAFA LKFFKVGAIA LLGGAAALKR FFGRKPKAAA
VPVIAEASGV PETERNE