Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4681 |
Symbol | |
ID | 4313573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1665910 |
End bp | 1666635 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638152525 |
Product | peptidase M50 |
Protein accession | YP_776565 |
Protein GI | 115359427 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.314846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAC TGCTGCTGCT GATCTTCGGC GGCCTGAAGC TCGGCAAGGT GCTCATGTCC GCGGGCACGA TGCTCGCGTC GATCGCGGTC TACGCGCTGT TCTACGGCTG GCGCTTCGCG GCCGGCTTCG TCGCGCTGCT GTTCGTGCAC GAGGCCGGCC ACTACCTGGC CGCGCAGCGG CGCGGTCTCG ACGTCGGGCT GCCGACGTTC ATTCCGTTCG TCGGCGCGTG GATCCAGTTG AAGGAGATGC CGCACGATGC CGAAACCGAG GCGTACGTCG GGCTGGCCGG GCCGTTCGTC GGCACGCTCG GCGCGCTGGC CTGCTACGCG GCCGCGCGCC ACTACGACAG CAACCTGCTG CTCGCTGTGT CGTACACGGG CTTCTTCTTG AACCTGTTCA ACATGATTCC GCTGTCGCCG TTCGACGGCG GGCGCATCAC CGCGGTGCTG TCGCCGCGCA TCTGGTTCGC GGGCGTGCCC GTGCTGATCG CACTGTTCGT GTACCGGCCG AGCCCGCTGC TGATCGTGAT GGCGATCCTC GCGCTGCCGC AGCTCAAGCG CGCGTGGCGC TACGACCCGG CCGCGCCGGA GAACCGCGCG TACTACGCGA CGTCGATCGA GACGAAGACG ACCTACGCGC TCTGCTACAT CGGCCTGGTC GCGTTTCTCG CGCTGATGAC GTCCGGCGTG CACGACATGC TGCGCGTCGC GCATTCGGCG GCCTGA
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Protein sequence | MTKLLLLIFG GLKLGKVLMS AGTMLASIAV YALFYGWRFA AGFVALLFVH EAGHYLAAQR RGLDVGLPTF IPFVGAWIQL KEMPHDAETE AYVGLAGPFV GTLGALACYA AARHYDSNLL LAVSYTGFFL NLFNMIPLSP FDGGRITAVL SPRIWFAGVP VLIALFVYRP SPLLIVMAIL ALPQLKRAWR YDPAAPENRA YYATSIETKT TYALCYIGLV AFLALMTSGV HDMLRVAHSA A
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