| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4664 |
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| Symbol | |
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| ID | 4313556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1647982 |
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| End bp | 1648836 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152508 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_776548 |
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| Protein GI | 115359410 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.589898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.583924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC CGTCTTTTCT GATCGGCCTG ATCGGCCAGG GTATCGCCGG TTCGCTGTCG
CCCGCGATGC ATGAGGAAGA AGGATTCCGC CAGGGATTCG GCTACGTGTA CCGCCGCATC
GATCTCGACG CGCTCGGCCT GACCGTCGAC GCGCTGCCGC AACTGCTCGA GGCCGCGCAG
CGGATGGGCT TCAACGGGCT GAACATCACG CACCCGTGCA AGCAGCGCGT GATCGAGCAC
CTCGACGCGC TGTCGGACGA CGCGCGCGCG CTCGGCGCGG TGAACACCGT GCTGTTCAAG
GACGGCAAGC GGATCGGCCA CAACACCGAC TGGTCGGGTT TCGCGAAGTC GTTCCGCCGC
GGGCTTCCCG ACGCGTCGCT CGAGCGCGTC GTCCAGCTCG GTGCGGGCGG CGCGGGCGCG
GCCGTCGCGC ATGCGGCACT GCAGATGGGC GCCGCCGAAT TGACGATTTT CGACGTCGAC
GGCACGCGTG CCGACACGCT CGCGAGCGAA CTGCAGCAGC GCTTCCCGGC CGCCCGGGTC
ACGCCGGGCA GCGATCTCGC GGCCGCGATG CGCGCCGCGA CGGGCCTGAT CCATGCAACG
CCGACCGGCA TGGCCAAGCA TCCGGGCCTG CCGCTGCCGG CCGAACTGCT CCACGCGGGA
ATGTGGGTGG CCGACATCGT GTATTTCCCA CTCGAAACCG AACTGATCCG CGCGGCGCGG
GCGGCCGGCT GCGCGACGCT GCCGGGCGGC GGAATGGCCG TGTACCAGGC CGTCGACGCG
TTCGAAATCT TCACCGGACG TACGCCGGAC GACGAGCGAA TGTTCGAGCA CTTTCAGTCG
CTCGTCGCGC GCTGA
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| Protein sequence | MSRPSFLIGL IGQGIAGSLS PAMHEEEGFR QGFGYVYRRI DLDALGLTVD ALPQLLEAAQ
RMGFNGLNIT HPCKQRVIEH LDALSDDARA LGAVNTVLFK DGKRIGHNTD WSGFAKSFRR
GLPDASLERV VQLGAGGAGA AVAHAALQMG AAELTIFDVD GTRADTLASE LQQRFPAARV
TPGSDLAAAM RAATGLIHAT PTGMAKHPGL PLPAELLHAG MWVADIVYFP LETELIRAAR
AAGCATLPGG GMAVYQAVDA FEIFTGRTPD DERMFEHFQS LVAR
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