| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4663 |
|---|
| Symbol | |
|---|
| ID | 4313555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1646580 |
|---|
| End bp | 1647947 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638152507 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_776547 |
|---|
| Protein GI | 115359409 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.858594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.41723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACA CCACCCACAC GAACGCCGCG CCAGCGCAGG CGGCCGGCAC GGTCCGGCGG
ACATCGGCGC GCTACAAGAT TCTCGCGCTG CTCGCGATCG GCACGATGAT CAACTATCTC
GACCGCACCG TGCTGGGGGT GGCTGCGCCG CAGCTCACCA AGGAGCTCGG CATCAACGCG
GCGGTGATGG GCATCATGTT CTCCGCGTTC TCGTGGACGT ACGTCGCAAT GCAGGTGCCC
GGCGGCCTGT TCCTCGACCG CTTCGGCAGC AAGGTCACCT ATTACTGGTC GATGACGCTG
TGGTCGCTGT GCACGTTCCT GCAGGGCTTC GTGCCGGGCA TCGCGACGCT GCTCGCGTGC
CGGCTCGGGC TCGGCGTGAC GGAGGCGCCG TGCTTCCCGA CCAACAGCCG CGTCGTCGCG
ACGTGGTTCC CGCAGAACGA GCGCGCGATG GCGACCGGTA CCTATACGGT CGGCGAATAC
ATCGGCCTCG CGTTCTTCAG CCCGGTGCTG TTCGCGCTGA TGGGCGCGTT TGGCTGGCGC
TCGCTGTTCT GGGTCGTCGG CGCGATCGGT ATCGCGTTCG GCCTGATCTG GTGGAAGTTC
TATCACGAGC CGCGTGATCA TCCGGCCGCG AACTCGGAGG AACTTGCCTA CATCGAGGCG
GGCGGCGGCC TGGTGCACGC TGTGCGCAAA GGCGACAACG GCGCCAAGGG CGCCAAGGGC
GCCAAGGGCG GCAAGGGCGA GCAGAAGAAG TTCAGCTGGT CGATGGCCGG CCAGCTGCTG
AAGAAGCGCC AGCTCGCGGG CATCTGCCTC GGCCAGTTCG CCGGCAACTC GACGCTCGTG
TTCTTCCTGA CCTGGTTCCC CACCTATCTC GCGACCGAGC GCCACATGGG CTGGCTGAAG
ATCGGCTTCT TCGCGGTGAT GCCGTTCATC GCCGCGTCGG TCGGCGTGAT GTTCGGCGGG
ATCTTCTCCG ACTGGCTGCT GCGTCGCGGC AAGTCGGCGA ACCTCGCACG CAAGCTGCCG
ATCATCGCGG GCCTGCTGCT CGCGTCGACG ATCATTCTCG CGAACTACGT GAAGAGCAAC
GAAGCCGTGA TCGCGATCAT GTCGATCGCC TTCTTCGCGC AGGGGATGGC CGCGCTCGGC
TGGACGCTCG TGTCCGACAT CGCGCCAGAC GGCCTGCTCG GCGTGACGGG CGGCATCTTC
AACTTCGCGG CGAACCTCGC GGGGATCGTC ACGCCGCTCG TCGTCGGCTT CATCGTCGCG
TCGACCGGCT CGTTCGTCGG CGCGCTGGTG TTCATCGGCG TGATCGCGCT GATCGGTGCA
CTGTCGTACA TCTTCGTCGT CGGCGACATC AAGCGGATCG AATGGTAA
|
|---|
| Protein sequence | MQHTTHTNAA PAQAAGTVRR TSARYKILAL LAIGTMINYL DRTVLGVAAP QLTKELGINA
AVMGIMFSAF SWTYVAMQVP GGLFLDRFGS KVTYYWSMTL WSLCTFLQGF VPGIATLLAC
RLGLGVTEAP CFPTNSRVVA TWFPQNERAM ATGTYTVGEY IGLAFFSPVL FALMGAFGWR
SLFWVVGAIG IAFGLIWWKF YHEPRDHPAA NSEELAYIEA GGGLVHAVRK GDNGAKGAKG
AKGGKGEQKK FSWSMAGQLL KKRQLAGICL GQFAGNSTLV FFLTWFPTYL ATERHMGWLK
IGFFAVMPFI AASVGVMFGG IFSDWLLRRG KSANLARKLP IIAGLLLAST IILANYVKSN
EAVIAIMSIA FFAQGMAALG WTLVSDIAPD GLLGVTGGIF NFAANLAGIV TPLVVGFIVA
STGSFVGALV FIGVIALIGA LSYIFVVGDI KRIEW
|
|---|
| |