Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4647 |
Symbol | |
ID | 4313539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1623309 |
End bp | 1624217 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638152486 |
Product | LysR family transcriptional regulator |
Protein accession | YP_776531 |
Protein GI | 115359393 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.71207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAC GATTCCATCT CGTCGTGATC CGTGAAGTCG AGCGCCAGGG CTCGTTGACC GCGGCCGCCA ATGCGCTGCA CCTCACGCAA TCGGCGCTCA GCCATACCGT CCGGAAAATC GAGCAGCAGC TCGGCACGCC GATCTGGGAT CGGGAGGGCC GCGGCCTGCG GCTGACGCAG GGCGGGCAAT ATCTGCTGAA GCTGGCGAAC CGCCTGCTGC CGCAGTTCGA GCTCGCCGAG GAGCGGATGA AGCAGTATGC AAAGGGCGAG CGCGGCACGC TGCGCATCGG GATGGAATGC CATCCGTGCT ACCAGTGGCT GCTGAAGGTC GTGTCGCCGT ACCTGTCGCG CTGGCCGGAC GTCGACGTGG ACGTGAAGCA GCGCTTCCAG TTCGGCGGCA TCGGCGCGCT GTTCGGCCAC GACATCGATG TGCTCGTGAC GCCCGACCCG CTGAACAAGC CGGGGCTGCG CTTCGATCCC GTGTTCGATT ACGAGCAGGT GCTGGTGGTC GCGGATGCGC ACCGGTTCGC GAACGCCGAC TACGTGACGC CCGAGCAGCT GACCGACGAG GTCCTGATCA CCTACCCGGT CGAGACCGAC CGGCTCGACA TCTACAACCA GTTCCTGACG CCGGCCGGCA TCGTGCCGCG GCGCCACAAG TCGATCGAGA CGACCGACAT CATGCTGCAG ATGGTGGCGA GCGGGCGCGG CGTGGCCGCG CTGCCGAGAT GGCTTGCCGA TGAATACGCG GACCGGATGC CGGTCGTGCC GGTCAAACTC GGCAAGAAGG GCATCGCGAA ACAGATCTTC CTCGGCATCC GCGACGCGGA CGCATCGATC GACTATCTCG CCGCATTCGT CGCGCTCGCG CGCGAATCGA CGTGGAGCGC GCCGCGCATG CTGCGCTAG
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Protein sequence | MLERFHLVVI REVERQGSLT AAANALHLTQ SALSHTVRKI EQQLGTPIWD REGRGLRLTQ GGQYLLKLAN RLLPQFELAE ERMKQYAKGE RGTLRIGMEC HPCYQWLLKV VSPYLSRWPD VDVDVKQRFQ FGGIGALFGH DIDVLVTPDP LNKPGLRFDP VFDYEQVLVV ADAHRFANAD YVTPEQLTDE VLITYPVETD RLDIYNQFLT PAGIVPRRHK SIETTDIMLQ MVASGRGVAA LPRWLADEYA DRMPVVPVKL GKKGIAKQIF LGIRDADASI DYLAAFVALA RESTWSAPRM LR
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