Gene Bamb_4632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4632 
Symbol 
ID4313524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1604818 
End bp1606086 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content72% 
IMG OID638152471 
ProductFAD dependent oxidoreductase 
Protein accessionYP_776516 
Protein GI115359378 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATT TCTACGAAGC CACCGTTACC CGCCAGCCCT ACCCGCAACT GACCGGCCCG 
ATCGATACGC AGGTCTGCAT CGTCGGCGGC GGCCTCGCCG GCCTGTGCAC CGCGCTCGGT
CTCGTCGAGC GCGGCGTGCA GGATGTCGTC GTGCTCGACG GCGAACGGGT CGGCTTCGGC
GCGTCGGGCC GCAACGGCGG CTTCGTGTTC GGCGGCTACA GCCTCGACAA CGCGGACCTG
CTGCGCGCGC TCGGCCGCGA CGAAGGCCGT CGCCTGTACC GGCTCACCGT CGATGCGGTC
GAGCTGATCC GCGCGCGGAT CGCCCGCTAC GGCATCGACT GCGACATCGT CGACGAGGGC
GTGATGCTCG CGAACTGGTT CGACGATCCG TCGCGGCTCG ACAGCGTGCG CACGCTGATG
AAGCAGGAAT TCAACGTCGA CTGGGAACCC GTCGCGACGG ACGCGCTGCG CGCGCGGCTG
AAGACGCAGC GCTATCACGG CGGCCTGTTC GAGCCGAACG CGTTCCACTT CCATCCGCTC
AAGTACGTGC TCGGCGTCGC GGCGGCCGCG TCGCGCGGCG GCGCGCGCGT GTACGAACGC
TCGGCTGCGC TCGGCATCGC GCGCGAAGGC GCCGGCTACG TCGTGCGCAC GGCGCAGGGC
ACGGTGCGTG CGAAGGACGT CGTGTTCGCC GGCGGCGGTT ATGCGCGCGG CGTGTCGCCG
CGCATCGAGC GCGCGGTGCT GCCGATCGCG ACCTACGTGA TCGCGACCGA GCCGCTCGGC
ACGCGGCTGC CGGACGCGAT CGATGCGCCG TACGCGATCT ACGACACGCG TTTCGCGTTC
GACTACTACC GTCCGCTGAA GGACACGCGG ATTCTGTGGG GCGGCCGCAT CTCGGTGCTC
GACCGCGGCC CCGACGCGAT CGCGCGGCTG CTGCGGCGCG ACCTGCTGCG CGTGTATCCG
CAACTCGACG GCGTGAAGGT CGAATACGCG TGGGGCGGGC TGATGAGCTA CGCGCGGCAC
AAGATGCCGC AGATCGGGCG CGACGCGGAC GGCGTGTGGC ACGCGATCGC GTTCGGCGGC
CACGGGATGG CGCCGACCAC CGTCGCCGGA GAAGCGCTCG CCGCCGCGCT GGCCGGCGAG
CGGCCGGTGC CGGAAGGCTT CGCCGCGTTC GGCCTCACGC GCACGTTCGG GCTCGCGGGC
CTCGCCGCCG CGCAGCTCAC GTACACCGCG TATCAGGCCC GCGACGCACT CGCGTCGTGC
CGGCGCTGA
 
Protein sequence
MQNFYEATVT RQPYPQLTGP IDTQVCIVGG GLAGLCTALG LVERGVQDVV VLDGERVGFG 
ASGRNGGFVF GGYSLDNADL LRALGRDEGR RLYRLTVDAV ELIRARIARY GIDCDIVDEG
VMLANWFDDP SRLDSVRTLM KQEFNVDWEP VATDALRARL KTQRYHGGLF EPNAFHFHPL
KYVLGVAAAA SRGGARVYER SAALGIAREG AGYVVRTAQG TVRAKDVVFA GGGYARGVSP
RIERAVLPIA TYVIATEPLG TRLPDAIDAP YAIYDTRFAF DYYRPLKDTR ILWGGRISVL
DRGPDAIARL LRRDLLRVYP QLDGVKVEYA WGGLMSYARH KMPQIGRDAD GVWHAIAFGG
HGMAPTTVAG EALAAALAGE RPVPEGFAAF GLTRTFGLAG LAAAQLTYTA YQARDALASC
RR