| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4629 |
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| Symbol | |
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| ID | 4313521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1598333 |
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| End bp | 1600831 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152468 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_776513 |
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| Protein GI | 115359375 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATAC AACGACTCTC CACCTACGCA CGCCGGATCG CGCTGTTCGC GTTGCTGCAG
TTCGCTGCGC TCGCGACCGC GTCGGCGTTT CCGGGCGCCG CATCCGCGCC GAGCGCGAGC
GGCGTCGGCG TCCCCGTGCC GACCATCTCG CTGAGCGACG CGGTTGCGCA GCTCAAGCAG
ATGCAGGTGC AACAGGACCG CATCAAGCAG CAGACGTCGA ACGCGACCAA CAGCAAGGAG
CTCGACGGGC TCGGCGAAGC AACGCAGGAA CTGAGCGCCG ATGTCGAGAA GCTGCAGAGC
GAGCTCGCGC CGCAGCGCAC GCAGATCCAG GCCCAGCTCG ACGTGCTCGG CCCGCCGCCG
GCGCCGGGCG CGTCGCCCGA AACGCCCGCG GTCGCGCAGC AGCGGGCGAC GCTGAACGCG
CGCAAGACGC AGATCGAAGC GGCGCTGAAG CAGGCGGCCG ACCAGAAGGC CAACCTGGCG
AACCTGAACG ACCAGTTCGC GAAACTGCAC CGCAGCCTGC TGCGCAATCA GCTCGCGTTC
CGTTCGGGCA GCATCTTCGG CGCGCAATTC TGGCTGCCGC TGTTCCATCT GTCGCCGGAC
GATGTCCAGC GCCTCGACGA CTTCAACGAC GAACTGCGCG ACATGCTGCG CTCGTCGTGG
ACACCCGGCC AGCGCGCCAT CACCACGCTG CTGCTGATCG CCGCGCTCGC GGTGTGGCTC
GGCGGCCGCC GCCTCGTCGA GCGCGGGCTC GCGTGGTTCT GCCTGAACCG TCTGCCGCCC
ACCCGGCTGC GCCGCAGCGC ACTGGCGCTG GCGACCGCAT TCTCGACGCT GCTGGCGACC
GCGGTCGCCG TGCAGGTGCT CTATCTCGCG CTCGCGCGCC ACTACGAGCT CACGCCGTCG
ATGAGCGATC TGTGGGACCA GTTCGCGAAG CTCGCCGTGA CCTGCGCGCT GATCGCCGGC
CTCGGCCGCG CGCTGCTCTG CACCAAGCAT CCGTCGTGGC GGCTGCCGGC GCTCGCCGAT
CCCGTCGCGC TCGCGATGCG GCCGTTCCCC GGCGTGCTGG CCGCGCTGCT GTTGATGTCC
GGCACGCTCG AATCGATCAA CCGGATCGTC GATACCAGCC TGTCCGTCAC GCTGCTCGGC
CGCGGCATCG TATCGCTCGT CGTCGCGCTG ACCGTCGGCG CGTCGATCCT GCGCGCGAAC
CGCGTACGCA CCGCGCTCGC GGCATCCGGC GAGGCGCCCG AGGAGCGGTC GACGCTCGCG
GGGCTGATCC ATGCGGGCGT CACGCTGGCG ATCGTCGTGT CGCTCGTTGC GCTGCTGATC
GGCTACATCA CGGTCGCGCG CTTCATCACG TACGAGCTCG TATGGTTCGA GATCGTGCTG
TGCAGCGTCT ACATCCTGAC GCAGCTCACG CGCGACGCGA GCGAAAGCCT GTTCTCCGCG
AACCTGTCGA GCGGCAAGCA GATCAAGCAC CTGTTCGCGC TCGACGACCG GCATCTCGAG
CAGGCGCACA CCGTCGTGTC CGGGCTCGGC ACGAGCCTGC TGATGCTGGT CGCGGCCATC
GCGCTGGTGA CGGGCGGCTT CGGCACGACG CCGAGCGACC TGCTCGACAG CGCGATCGCG
ATGATCGGCG GCCAGCGGCT GCAGAGCCTG AACATCATGC CCGACCGGAT CCTGAACGCC
GTCATCGGGT TCGCGATCGG CTTCTACCTG CTGCGCTCGG TGCGCCGCTG GCTCGACAAC
GAATTCATGC CGGCGCTCGG CATGGACGCG GGCATGCGCG TGTCGCTGGT CACGCTGTTC
ACCAACGTCG GCTACGTGTT GCTCGTGCTG ATGACGCTGG GGCTGCTCGG TGTCCGGTGG
AGCAACCTCG CGTGGATCGT CAGCGCGCTG TCGGTCGGTA TCGGTTTCGG CCTGCAGGAG
ATCGTGAAGA ACTTCGTGTC GGGGCTGATC CTGCTGACCG AGCGGCCGGT GAAGGTCGGC
GACATGGTCA GCATCGCGGG CGTCGAAGGC GACATCCGCC GCATCAACGT GCGCGCGACC
GAGATCCAGC TCAGCGATCG TTCAACCGTG ATCGTGCCGA ACTCGCAACT GATCTCGCAG
AACGTGCGCA ACGTGACGAT GGGCAACAGC ACGCAAGGCG TCGCGACGCT GACGCTGACG
TTCCCGCTGA ACACCGATCC CGTGCAGGTG CGCGACCTGC TGCTCGATGC GTATCGCGAA
CACCCGGCGA TTCTCGACAA GCCGGCGCCG TCGGTCACGT TCAGCCAGCT GGCGCCGGAC
GGGATCACGC TGAGCGTGAC GGGCTACGTG GCGAGCCCGC GGATCGCGGC CTCGACCAAA
AGCGACCTGC TGTTCGAGAT CCTGAAGCAG TTGCGCGCGG CGCAGATCAC GCTGTCGACG
CCGCAGATGC TGGTCGTGCA GAACATGCCG ACGCTCGAGA ATTCCCCGCA GCACGAGCCG
GAAGCGAACC CGCGGCTGCA CGCTGGTCGA TCCTCGTAG
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| Protein sequence | MSIQRLSTYA RRIALFALLQ FAALATASAF PGAASAPSAS GVGVPVPTIS LSDAVAQLKQ
MQVQQDRIKQ QTSNATNSKE LDGLGEATQE LSADVEKLQS ELAPQRTQIQ AQLDVLGPPP
APGASPETPA VAQQRATLNA RKTQIEAALK QAADQKANLA NLNDQFAKLH RSLLRNQLAF
RSGSIFGAQF WLPLFHLSPD DVQRLDDFND ELRDMLRSSW TPGQRAITTL LLIAALAVWL
GGRRLVERGL AWFCLNRLPP TRLRRSALAL ATAFSTLLAT AVAVQVLYLA LARHYELTPS
MSDLWDQFAK LAVTCALIAG LGRALLCTKH PSWRLPALAD PVALAMRPFP GVLAALLLMS
GTLESINRIV DTSLSVTLLG RGIVSLVVAL TVGASILRAN RVRTALAASG EAPEERSTLA
GLIHAGVTLA IVVSLVALLI GYITVARFIT YELVWFEIVL CSVYILTQLT RDASESLFSA
NLSSGKQIKH LFALDDRHLE QAHTVVSGLG TSLLMLVAAI ALVTGGFGTT PSDLLDSAIA
MIGGQRLQSL NIMPDRILNA VIGFAIGFYL LRSVRRWLDN EFMPALGMDA GMRVSLVTLF
TNVGYVLLVL MTLGLLGVRW SNLAWIVSAL SVGIGFGLQE IVKNFVSGLI LLTERPVKVG
DMVSIAGVEG DIRRINVRAT EIQLSDRSTV IVPNSQLISQ NVRNVTMGNS TQGVATLTLT
FPLNTDPVQV RDLLLDAYRE HPAILDKPAP SVTFSQLAPD GITLSVTGYV ASPRIAASTK
SDLLFEILKQ LRAAQITLST PQMLVVQNMP TLENSPQHEP EANPRLHAGR SS
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