Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4627 |
Symbol | |
ID | 4313519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1596442 |
End bp | 1597869 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638152466 |
Product | major facilitator transporter |
Protein accession | YP_776511 |
Protein GI | 115359373 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGA CCGTGCCTGA TCCCGCTTCC GTAGCGGACA CCTTTCGAAC TGCCCCCATC GACGCCGGCT CGATTTCAGC CCGCCTCGAC CGCCTGCCGC CGACCCGCAG CGTCTGGAAG CTCGTCGTGC TGCTGAGCCT CGGCTTCTTC TTCGAACTCT ACGACCTGCT GTACAGCGGC TACATCGCGC CGGGCCTCGT GAAAAGCGGG ATCCTGTCCG CGACGACGCA CGGCCTGTTC GGCACCACGG GCGTCGCGAG CTTCATCGCC GCGTTGTTCT CCGGCCTCTT CATCGGCACG ATCGCATGCG GCTTCCTCGC GGACCGCTTC GGCCGCCGGG CGATCTTCAC GTGGTCGCTG CTGTGGTACA CGGCCGCCAA CGTCGTGATG GCGTTCCAGG ACACCGCGGG CGGATTGAAC TTCTGGCGCT TCGTCGTCGG TCTCGGCCTC GGCGTCGAGA TGGTCACGAT CGGCACGTAT ATCTCCGAAC TCGTGCCGAA GCAGATCCGC GGCCGCGCAT TCGCATGCGA ACAGGCGGTC GGGTTCGTCG CGGTGCCGGT GGTCGCGTTC CTCGCGTACC TGCTCGTGCC GCATGCGCCG TTCGGTCTCG ACGGCTGGCG CTGGGTCGTG CTGATCGGCG CGCACGGCGC GCTGTTCGTG TGGTGGATTC GCCGCGCGTT GCCGGAAAGC CCGCGCTGGC TCGCGCAGCA GGGGCGCATC GAAGAAGCCG ACCGCATCAT GCGCGCGCTC GAGGCGAAGG TCGAAGCCGA ATACGGTCGG CCGCTGCCGC CGCCCGCGCC GCCCGAGCCG GTGCCGCCGC GCGGCAGCTT CCGCGACATG TGGGTGCCGC CGTATCGCAG CCGCACGATC ATGATGACGA TCTTCAACGT GTTTCAGACG GTCGGTTTCT ACGGCTTCGC GAACTGGGTG CCGACGCTGC TGATCAAGCA GGGCATCACG ATCACGTCGA GCCTCATGTA TTCGAGCGTG ATCGCGCTCG CGGCGCCGCT CGGTCCCCTG ATCGGCCTCG TGATCGCCGA TCGTTTCGAG CGCAAGTCGG TGATCGTCGC GATGGCGGCG GCGATCGTCG TCTGCGGGCT GATGTTCAGC CAGACGACGG TGGGCGCGTT CCTGATCGTG CTCGGCATCG GCCTCACGCT CGCGAGCAAC ATCATGTCGT ACAGCTTCCA CGCGTACCAG GCCGAACTGT TCCCGACGTC GATCCGCGCA CGCGCGGTGG GCTTCGTCTA CTCGTGGAGC CGCTTCTCGG CGATCTTCTC GTCGTTCGTG ATCGCGGCCG TGCTGAAAGG CTTCGGCACG TTCGGCGTGT TCGCGTTCAT CGCCGGCGCG ATGGTGATCG TGATGGCCGC GATCGGGCTC ATGGGGCCGC GCACCAAAGG CATCGCGCTC GAAGCGATTT CGAAGTAG
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Protein sequence | MASTVPDPAS VADTFRTAPI DAGSISARLD RLPPTRSVWK LVVLLSLGFF FELYDLLYSG YIAPGLVKSG ILSATTHGLF GTTGVASFIA ALFSGLFIGT IACGFLADRF GRRAIFTWSL LWYTAANVVM AFQDTAGGLN FWRFVVGLGL GVEMVTIGTY ISELVPKQIR GRAFACEQAV GFVAVPVVAF LAYLLVPHAP FGLDGWRWVV LIGAHGALFV WWIRRALPES PRWLAQQGRI EEADRIMRAL EAKVEAEYGR PLPPPAPPEP VPPRGSFRDM WVPPYRSRTI MMTIFNVFQT VGFYGFANWV PTLLIKQGIT ITSSLMYSSV IALAAPLGPL IGLVIADRFE RKSVIVAMAA AIVVCGLMFS QTTVGAFLIV LGIGLTLASN IMSYSFHAYQ AELFPTSIRA RAVGFVYSWS RFSAIFSSFV IAAVLKGFGT FGVFAFIAGA MVIVMAAIGL MGPRTKGIAL EAISK
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