| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4625 |
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| Symbol | |
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| ID | 4313517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1593379 |
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| End bp | 1594491 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638152464 |
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| Product | porin |
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| Protein accession | YP_776509 |
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| Protein GI | 115359371 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0866781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC TCTACAAGCT CGCTCCGCTC GCGATGCTCG GCGCCTTCGC GACCCATGCC
GGTGCGCAAA GCAGCATCAC GCTGTACGGT CTCATCTCGG CCGGCGTCGG GTACGCAACC
AACCAGGGCG GCAAGAACGC GTGGCAGGCG CTGTCCGGCA CGAACCAGAA TCCGCGCTGG
GGGCTGAAGG GCAAGGAGGA TCTCGGGCAG GGGCTGTCGG CGATCTTCCA GCTCGAGAAC
GGCTTCAACG TGATGACGGG CACGGCCGCG CAGAACGGCC GCGAGTTCGG GCGCATGGCC
TACGTGGGCC TCGCCGACCG CACCTACGGG TCGCTGACGT TCGGCCGCCA GTACGATGCG
ATCCACGACT ACATCGGGCC CGTGATCATC GCGAGCAACG GCGTGAACAT CGGCGACAAC
GACAACGGCT ACAACGACAT CCGCGTGCAG AACTCGGTGA AGTACGTGAG CCCTGTCTAC
TACGGCCTGA AGTTCACCGC GCTGTACGGC TTCAGCAACG CGACGGGCTT CGCGAACAAC
AGCGCGTACA GCTTCGGTCT CGGCTACGAG CGCGGCCCGC TGCGCTGGAG CGTGGTCTAC
GCGCAGTACA ACCATCCTTA CAGCAGCACG AATCAGGACG GCGCGATCGC GAACGACTAT
GGTTCGCCGC TGCTGATCTT CGCGAAGAGC GCGATGTCGC CGGCGGTATT CGCGAGCCGG
CAGCGTATCG CGGGCACGGG CGGTTTCTAC ACGATCGGCC GCGCGCAGTT CGCGGCGCTG
TTTACCGACG TGCGCTACGA TTACCTCGAC AATTCGCATC TGCACCTGCA GAACGTCGGC
GTGAACGTCG TCTATACGAT GACGCCGCAG CTCTTTCTCG GTGCCGCGTA TGCGTTCACG
AACGGCAAGT ACGACGTGAT CGACAAGCGG CCGAAATGGC ATCAGGTGAA CCTGCAGGCC
GACTACTTCC TGTCGAAACG CACCGACGTC GCGCTGACGG TGATCGCACA GCAGGCGGCC
GGCGACGCGG ATCACGCGCA AATCTTCGCG TACGCACGCT CGACCGGCAC GCGCCAGATG
ATGGCGACGC TCGGCGTGCG GCACGTATTC TGA
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| Protein sequence | MKTLYKLAPL AMLGAFATHA GAQSSITLYG LISAGVGYAT NQGGKNAWQA LSGTNQNPRW
GLKGKEDLGQ GLSAIFQLEN GFNVMTGTAA QNGREFGRMA YVGLADRTYG SLTFGRQYDA
IHDYIGPVII ASNGVNIGDN DNGYNDIRVQ NSVKYVSPVY YGLKFTALYG FSNATGFANN
SAYSFGLGYE RGPLRWSVVY AQYNHPYSST NQDGAIANDY GSPLLIFAKS AMSPAVFASR
QRIAGTGGFY TIGRAQFAAL FTDVRYDYLD NSHLHLQNVG VNVVYTMTPQ LFLGAAYAFT
NGKYDVIDKR PKWHQVNLQA DYFLSKRTDV ALTVIAQQAA GDADHAQIFA YARSTGTRQM
MATLGVRHVF
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