Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4624 |
Symbol | |
ID | 4313516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1592316 |
End bp | 1593368 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152463 |
Product | inosine/uridine-preferring nucleoside hydrolase |
Protein accession | YP_776508 |
Protein GI | 115359370 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.122838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATC CGATCGCATC CCGCCGCACC TTCCTGAAAC TGTCCGCCGC GTTGGCCGGC ACCGCGCTGC TGCCCGAAAC GGGCGCGTTC GCGGCCGGCG GCGACGCCGC GCGGCGCACG GTGATCATCG ATACCGACCC GGGGCAGGAC GACGCCATCG CGATCCTGTT CGCGCTCGGC GCGCAGGACC GCCTCGACGT GCGCGCGCTG ACCGCCGTGG CCGGCAACGT GCCGCTCGAG CTGACCGAAC GCAATGCGCG GATCATCCGC GACTGGGCCG GCCGCACGCA GACGCTGCCG GTGTTCGCGG GTTGCCCGCG CCCGCTCGTG CGCGAGCTCG TGACGGCCGC GAACGTGCAC GGCAAGACCG GCCTCGAAGG TGTCGCGCTG CACGAACCGC GCGCGCCGCT CGCGGCCGGG CATGCGGTGT CTTACCTCGT CGATACGCTG AGCCGCGCGG CGCCGAACAG CGTGACGCTG TGCGCGCTCG GCCCGCTGAC GAACATCGCG ACCGCGCTGG TCGAAGCGCC GCAGATTCGC GGCGCGTTGC GCGAGATCGT GCTGATGGGC GGCGCGTTTT TCGAGCGCGG CAACATCACG CCGGCCGCGG AGTTCAACAT CTACGTCGAT CCGCAGGCGG CCGAAATCGT ATTCGGCAGC GGGGTGCCGA TCGTCGTGCT GCCGCGCGAC GTCGCGGTGA AGGCGCCGAT CACGCCGGCG CGCGTCGCGC CGTTCCGTGC GCTCGGCAAC CGCTGCGGCG CGATCGTCGC GGACATCATG GACGCCGAGC TCGCGTACAA CAGGAAGCGG CGCGGTGTCG ACGACGGGCC GATGTACGAC CCGACGGCGG TCGGCTATCT CGTCGATCCG ACGCTGTTCA ACGGACGCAA GGTGAACGTC GTCGTCGAGA CGACCGGGCA GTGGACGCTC GGCGAGACGG TGATCGACTG GAACGGGCGC AGCGGCCGCG CGCCGAATGC GACGTGGATC AACGAGGTCG ACGCGGACCG CTTCTACGCG ACGCTCGCCG AGCGCATCGC GAAGCTGCCC TGA
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Protein sequence | MTHPIASRRT FLKLSAALAG TALLPETGAF AAGGDAARRT VIIDTDPGQD DAIAILFALG AQDRLDVRAL TAVAGNVPLE LTERNARIIR DWAGRTQTLP VFAGCPRPLV RELVTAANVH GKTGLEGVAL HEPRAPLAAG HAVSYLVDTL SRAAPNSVTL CALGPLTNIA TALVEAPQIR GALREIVLMG GAFFERGNIT PAAEFNIYVD PQAAEIVFGS GVPIVVLPRD VAVKAPITPA RVAPFRALGN RCGAIVADIM DAELAYNRKR RGVDDGPMYD PTAVGYLVDP TLFNGRKVNV VVETTGQWTL GETVIDWNGR SGRAPNATWI NEVDADRFYA TLAERIAKLP
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