Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4617 |
Symbol | |
ID | 4313509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1582213 |
End bp | 1583763 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638152456 |
Product | GntR family transcriptional regulator |
Protein accession | YP_776501 |
Protein GI | 115359363 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.814489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAA CCGCCCGGAT CGTCGAAATC CCGTCGCTCG GCGCGCTCGA CCGCGCGGCC GGCGACCTGA GCCGTCAGCT CGCGCAGGCG TTGCGGGACG CGGTGCGCCG CGGCGACGTG CGGCCCGGCG ACACGCTGCC GTCCACGCGC CTGCTCGCGG CATCGCTCGA GGTTGCACGC GGCACCGTCG TCGACGCGTA TGCGCAGCTC GTCGCCGAAG GCTTCCTGGA GTCGCGCGGC GGCGCCGGCA CGCGGGTCGC GAACGCGCTG GCCGAACCGC CGCCGGCCGG CGAACCAGCG GCGGCCCGCC CGCGCGCTGC GCACGCCGGC CTGCCCGAGC CGGCCGCGAC GTTCGCGCGG ATCGCCCGCG AATTCCGGCC GCTGCCGGCC GCGCCGTTCG CGATCTCGGT GCCGGTCGGG CTCACCGCGC CCGACGACAT CTGGCGCCGG CTCGGCAACC GGCTGCGCGC ACGCGGTGCC GGTGCGCCGT CCGGCTATGC GGATCCCCAA GGTGCGTTGC CGCTGCGTGA AGCGATCGCC GATTACGTGC GCCGCTCGCG CTCGGTGCGC TGCAGCGCCG ATCAGGTCGT GATCACGAGC GGCACGCAAC AGGGGCTGCA TCTCGCGAGC CAGGTGCTGC TCGGCGCGCA TGATCGCGCG TGGGTCGAGA ATCCCGCCTA TCGCGGCATC ACCGCGCTGC TCGAGAGCAC CGGGCGCCGC GACGCGATGG TGCGCGTGCC GGTCGACGCG GACGGCATCG ACGTCGAGGC CGGCATCCGC ATCGCACCGG ACGCCCGCGC GGCCTTCGTC ACGCCGTCGC ACCAGTACCC GCTCGGGATG CCGATGAGCA TGGCGCGGCG CAACGCGCTG CTCGGCTGGG CGCGCACACA TCGCGCATGG GTGGTCGAGG ACGATTACGA CAGCGAGCTG CGCTACGAGG GCTATCCGTT TCCGTCGCTG CAGGGGCTCG ACCCCGAGCG CGTGGTTTAT CTCGGCACCT TCAGCAAGAT CCTGTTTCCG TCGCTGCGGC TCGGCTACGT AATCGCGCCC GACGATCTCG TGCCGGCCTT CTGCGGTGCA CGCGTACTGA TGGATCGCCA TGCGCCGACC GCCGATCAGC ACGTGCTCGC CGCGTTCATC GCGGAAGGCC ATCTCGACCG CCACATTCGC CGCGTGCGCG GCGTCTACGC GGAACAGCGC GCGCTGCTGA TCGACACGCT CGGCGCGCGG CTGCCACGCG AGCGCGCATG GGTGCAGCCG GGAGATCAGG GCATGCACGT GGTGCTGTGG CTCGCGCAAG GGATCGACGA TCTCGACGTG GTGGCGCGCG CCGCGCAGGC GGGCGTCGCG GTGCGGGCGG TGTCGCCGAT GTTCGCGCCG GGCACCGAGC GTCCGGGCCT CGTGCTCGGT TTCGGCGGGT TCGATCGTGC GCGGATGGAA GCGGCCGCCC AGCGGCTCGC GGATGTGGTG GGCGACGCGG CCGGCGCCGA TTCATCCGAC GAATCGCGAC GCCGCACGCG ATCAAAGGTT GTCCGCGGGC AACAAACGTA A
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Protein sequence | MARTARIVEI PSLGALDRAA GDLSRQLAQA LRDAVRRGDV RPGDTLPSTR LLAASLEVAR GTVVDAYAQL VAEGFLESRG GAGTRVANAL AEPPPAGEPA AARPRAAHAG LPEPAATFAR IAREFRPLPA APFAISVPVG LTAPDDIWRR LGNRLRARGA GAPSGYADPQ GALPLREAIA DYVRRSRSVR CSADQVVITS GTQQGLHLAS QVLLGAHDRA WVENPAYRGI TALLESTGRR DAMVRVPVDA DGIDVEAGIR IAPDARAAFV TPSHQYPLGM PMSMARRNAL LGWARTHRAW VVEDDYDSEL RYEGYPFPSL QGLDPERVVY LGTFSKILFP SLRLGYVIAP DDLVPAFCGA RVLMDRHAPT ADQHVLAAFI AEGHLDRHIR RVRGVYAEQR ALLIDTLGAR LPRERAWVQP GDQGMHVVLW LAQGIDDLDV VARAAQAGVA VRAVSPMFAP GTERPGLVLG FGGFDRARME AAAQRLADVV GDAAGADSSD ESRRRTRSKV VRGQQT
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