Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4616 |
Symbol | |
ID | 4313508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1581446 |
End bp | 1582084 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152455 |
Product | negative transcriptional regulator |
Protein accession | YP_776500 |
Protein GI | 115359362 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATGTCC CCGCCGATTT CGCCGAATCC CGCCCCGACG CGCTGCGCGA GCTGATCGTC CAGCATCCGT TCGGCAGCCT GATCACGCAC GGCAAGGGCG GGCTCGACGC GAACCACATT CCGTTCGAAC TGCTGCCGGG CGACGGCGGC CTCGGCGAGC TGCAGGCGCA CGTCGCGCGC GCGAATCCGG TCTGGCAGGA GGTTGCGAAC GGCGACGAGG TGCTCGTGAT CTTCCGCGCC GGCGATGCGT ACATTTCGCC GAACTGGTAC CCGAGCAAGC ACGTCGCGCA CCGGCAGGTG CCGACGTGGA ACTACGTGGT CGTGCACGCG CACGGCCGCA TCACGGTGCG CGACGACGAG AAGTTCGTGC GCGGCGTGGT CGCGCGGCTG ACCCGCACGC ACGAGGCGTC GCAGCCGGCG CCGTGGAAGA TGGCCGACGC GCCGAAGGAT TATCTCGACA CGATGTTGCA GTCGATCGTC GGGCTGCAGA TCGAGATCAC GCGGCTCGTC GGCAAGCGCA AGCTCGGGCA GAACAAGGCG GTCGACGATA TCCGCGGCGC GGGCGACGCG CTGATCGCCG GCGGGCAGCT CGCGATCGGG GAGGCGATGC TGGCGGAGGC GGACGCGAAG CTCAAGTGA
|
Protein sequence | MYVPADFAES RPDALRELIV QHPFGSLITH GKGGLDANHI PFELLPGDGG LGELQAHVAR ANPVWQEVAN GDEVLVIFRA GDAYISPNWY PSKHVAHRQV PTWNYVVVHA HGRITVRDDE KFVRGVVARL TRTHEASQPA PWKMADAPKD YLDTMLQSIV GLQIEITRLV GKRKLGQNKA VDDIRGAGDA LIAGGQLAIG EAMLAEADAK LK
|
| |