| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4608 |
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| Symbol | |
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| ID | 4313500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1574700 |
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| End bp | 1575893 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152447 |
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| Product | porin |
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| Protein accession | YP_776492 |
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| Protein GI | 115359354 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC AACTGATCGC AGCACCGCTG CTGCTCTCGC TCGCGGGCGT CGCATCCGCG
CAAAGCTCCG TCACGCTGTA CGGCATCGTC GACGCGGGCG TGACCTATCG CAGCAACGAA
CGGGTCGGCT CGCCGGGCGC CTACACCGGG CATTCGGAAG TCGGCCTGAC CACCGGCAAC
CTGTCGGGCA GCCGCTGGGG CATCAAGGGT TCCGAGGATC TCGGCGGCGG AATGCGCGCG
CTGTTCGTGC TCGAGAACGG TTTCGACGTG ACCAACGGCA CGTCGGGCCA GGGCGGCCGC
CAGTTCGGCC GCCAGGCGTT CGTCGGCGTC GGCAGCACCC GCTACGGCAC GGTCACGCTC
GGCCGCCAGT ACACGTCGCT CAACGACTTC GTGAGCCCAG TGGCTCCGTC GTCGTTCATC
GGCGGGTTCG GCGCGCACCC GGGCGACATC GACGATCTCG ACCAGACCGC GCGCGTCGAC
AGCTCGATCA AGTACACGAG CGCGAACTAC GCGGGCTTCA CGTTCGGCGC GCTGTACGGC
TTCGGCAGCC AGCCGGGCAG CATGAAGCAG CGCAACACGT GGAGCGTCGG CGCCGCATAC
GCGGCAGGGC CGCTGCGCGT GGGCGTCGGC TACGAGCGCT CGGACAACAG CAAGACGGGC
GCGACCGATC CGACGGCCGG CAAATGGCAG AGCACCGATG ATGGGCTGTT CAACTCGTCG
ATCAACGAAG GCTATGCGAG CGCGCAGTCG CAGCAGGTGA TCGCAACCGG CGCGACGTAC
AACTTCGGCC CGGCCGTCGT CGGCGTGAAC TACAGCAACA TTCAGTACCG CAGCGGCGCG
CAGTCGCTGT TCAGCGGTCA TGCGACGTTC AACGTCGCGG GCGTGTTCAC GCGCTGGAAC
GTACAGCCGC AGACCCAGCT GTTCGTCGGC TACAGCTACA CGCGCGGCAG CGACGTCGAC
GGCATCGACG ACCGCGCGCA GTATCACAAC GTCACGCTCG GCGCGGTCTA CGACCTGTCG
AAGCGCACCA GCGTGTACCT GCTCGGCGCG TACCAGCGTG CGTCCGGCAC GACGCTCGAC
GCACTCGGCC GGCCGGTGGC CGCGACCGCG GCGGCGTCGG ACAAGGCGAA CGGCCACTCG
TCCGATTCGC GATCGCAGGC AATCGTCAGC CTCGGCCTGC GTCAGAAGTT CTGA
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| Protein sequence | MNKQLIAAPL LLSLAGVASA QSSVTLYGIV DAGVTYRSNE RVGSPGAYTG HSEVGLTTGN
LSGSRWGIKG SEDLGGGMRA LFVLENGFDV TNGTSGQGGR QFGRQAFVGV GSTRYGTVTL
GRQYTSLNDF VSPVAPSSFI GGFGAHPGDI DDLDQTARVD SSIKYTSANY AGFTFGALYG
FGSQPGSMKQ RNTWSVGAAY AAGPLRVGVG YERSDNSKTG ATDPTAGKWQ STDDGLFNSS
INEGYASAQS QQVIATGATY NFGPAVVGVN YSNIQYRSGA QSLFSGHATF NVAGVFTRWN
VQPQTQLFVG YSYTRGSDVD GIDDRAQYHN VTLGAVYDLS KRTSVYLLGA YQRASGTTLD
ALGRPVAATA AASDKANGHS SDSRSQAIVS LGLRQKF
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