Gene Bamb_4607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4607 
Symbol 
ID4313499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1572249 
End bp1574171 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content66% 
IMG OID638152446 
Producthypothetical protein 
Protein accessionYP_776491 
Protein GI115359353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0258623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCGA AACAAATTCG CGCGGCATTG CTTGGATTGT GCATGGCCGT GCTGGCGCCG 
GTCAGTCACG CACAGGCGCA ATACACGACG GACTGGGTCG CAAACACGTT CGGCACGCTG
GCCGCGCACG TTGGCAACGG CGCACGCTCG TTGTGGGTCG CGCCCGAAGG CGTGATCTAT
ACGGCGTCGC GCTGGGACGA GAACGCCGGC GGCGTCGCGA TCTACCAGAA CGGGCAGACG
CTCGGCACGA TCGGCATCCA CGACGAATTC CAGGGCGGCG CGATCACCGG CAACGCGAAC
TCGCTGTTCG TCGCGCTCGG CTACAACCGC ACGTTCGGCA GCGGCTCGGT CGGCCGCTAC
AACCGCAGCA CGAACCAGCG CGACTTGCGC ATCCCGGTCA GCACGTGGAC GGGCATCCAG
TACGCGGACG TGATCACCGG CCTCGCGACG ACCGGCAACC TGCTGTACGT GAGCGACTTC
TACGGCAACC GCGTGCGTGT GTATACGACG GACGGCGTGT GGCAGCGCGA CATCAGCGTA
TCGGGGCCCG GCGCGCTCGC ACTCGACGCG GGGGGCAACC TGTGGGTCGC GCGCAAGAGC
GCGGGTATCG TCGCGCAGTT CAGCCCGACC GGCACGGCGA TGAACACGAT CCAGATGGCG
GCACGCGCGC GGCCCGCGTC GCTGTATTTC GATGCGCCAA GCGGACAGAT GCTGGTGGGC
GACGAAGGGC CCGACATGAA CATCAAGGTC TACACGCTCG CCGGCCTGCC CTTGCAGATC
GGTACGTTCG GCGTGCTGGG CGGCTATCTC GACACGACGT CGGGCATCAA GGGGCAGGTC
GGCGACAAGC GCTTCACGCG CGTCGCGGGC ATCGGCAAGG ACGCGGCCGG CAACCTGTAC
GTGCTGAACA ACGCGTGGGG CGGCGGCTGG GATCTCGGGC GCAACGGCAG CACCGACCTC
CATTCGTACA GCCCCACGGG CGTGCTGCAA TGGAAGCTGC AGGCGCTGAA CTTCGAGGGC
GCCGCCGCGC CCGACCCGGC GACCGACGGC GCGTTCTTCT ACAGTGGCAA CAACGTCTAT
ACCGGTACGG CGGGCGGCAC GTTCGTCGCG AACACGATCG ATCCGTTCAC CTATCCGAAG
GACCCGCGTC TCGACATGAA GGACTACCAG CGCGGCCAGC ATTTCGGCCA GCTCGCGCTG
GTGAAGGGCA CCCGGATGCT CGTCGCGACC GGGCAGAACC CGGGCAACTA CAACATCTAT
CACTTCAACA GCGCGAGCGG CTATATCGCG ATTCCGGACG GCTCGATCCC CGGCAAGCCG
TTCAACACGA CCCTGCAGGT GACGGCCGGT TTCTCGCTCG ACGACAACGG CGACGTATGG
GCCGGGCTCG ATCGCACCAA CAACATCTCG CACTATCCGA TGACGGGCTT CGACGCGACC
GGCAAGCCGA CCTGGGGCAC GCCGGTGCAG ATCCAGATTC CGCGCACGGT GCTGCCGCTC
ACGCGGATCA TCTACCAAGC CGACAGCGAC ACGATGATCC TCGCGCAAGG CCTCTCGGGC
AGCTGGGACT GGACCGCGAT GAACGGGCAC ATCGAGGTCT ATCGCGGCTG GAAGGCCGGC
AACACGACCA CGCCGAACGT GGCGATCGAC CTGACGAGCG CGAACCCGAA ATCGATGGCG
GCGGCCGGCC ACTACCTGTT CGTCGGCTAC GTGCACACGG TGCCGAACGT CGACGTGTTC
GACCTGAACA CCGGCAGTCT CGTCACGACG CTGACGAACT CGAACACGTC CGCGATGGAC
GTCGGCAACG ACGTCGACTC GATGTACGGC ATCCGCGCGT ACCGGCGCTC GACCGGCGAA
TACGTGATCA CGAAGGACAA CTACAACGGG TCGAGCGTCG TCGTGTATCG TTGGCGTCCG
TGA
 
Protein sequence
MLSKQIRAAL LGLCMAVLAP VSHAQAQYTT DWVANTFGTL AAHVGNGARS LWVAPEGVIY 
TASRWDENAG GVAIYQNGQT LGTIGIHDEF QGGAITGNAN SLFVALGYNR TFGSGSVGRY
NRSTNQRDLR IPVSTWTGIQ YADVITGLAT TGNLLYVSDF YGNRVRVYTT DGVWQRDISV
SGPGALALDA GGNLWVARKS AGIVAQFSPT GTAMNTIQMA ARARPASLYF DAPSGQMLVG
DEGPDMNIKV YTLAGLPLQI GTFGVLGGYL DTTSGIKGQV GDKRFTRVAG IGKDAAGNLY
VLNNAWGGGW DLGRNGSTDL HSYSPTGVLQ WKLQALNFEG AAAPDPATDG AFFYSGNNVY
TGTAGGTFVA NTIDPFTYPK DPRLDMKDYQ RGQHFGQLAL VKGTRMLVAT GQNPGNYNIY
HFNSASGYIA IPDGSIPGKP FNTTLQVTAG FSLDDNGDVW AGLDRTNNIS HYPMTGFDAT
GKPTWGTPVQ IQIPRTVLPL TRIIYQADSD TMILAQGLSG SWDWTAMNGH IEVYRGWKAG
NTTTPNVAID LTSANPKSMA AAGHYLFVGY VHTVPNVDVF DLNTGSLVTT LTNSNTSAMD
VGNDVDSMYG IRAYRRSTGE YVITKDNYNG SSVVVYRWRP