Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4589 |
Symbol | |
ID | 4313481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1551918 |
End bp | 1552664 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152428 |
Product | TetR family transcriptional regulator |
Protein accession | YP_776473 |
Protein GI | 115359335 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.954889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCCG CTCCCGCCGA CACCATGACC GCAACTGCCA GACCCGACCG CGCCGACCCG TCGCGCGCAC CCGCCGGGCG CAAATCCCAG CAGCGCGTGC AGGACATCCT GCGCGCCGGT CGTGAAGTGT TTGCCGAAAA GGGTTACGAG CATGCGACGG CCGCCGAGAT CGCGCAGCGC GTCGGCGTGT CGGAGGCGAC GGTGTTCAGC TATTTCCGCG GCAAGCGCGA GCTGTGCGCG CGCGTGATCG CCGATTGGTA CGACGAAATC ATTGCCGCGT TCGAACACGG GATGCCGGTG GAAGCATCGG TGCAGCACCA GTTCGCGTTC ATCGTGCGCA CCCACCTGCG GCTGATGCTG GTGAACGGCA CGGGGCTGTG CGCGCTGGTG CTGTCGGAGG GTCGTGCGAA GCAGCATGCG CTGAGTGACG AGCTCACCGC GCTGCAGCGC CGCTACACGG CGCCGCTGAT GGACGTGCTC GCGCGCGGCC AGGCAGCCGG GCAGGTGCGC CGCGACATGC CGCTGAGCCT GCTGCGCTCG ATGGTGTTCG GGCCGATCGA GCACGTGCTG TGGGATGCGA TCCTCGGGCA CCGCAAGCTC GATACGGAAA CGACGGTCAC GCAGTTGGTC GACATGCTGT GGGCGGCCGT GCAGCCGCCC GCGCCGGAGC AGGCGGCGTT GGTGCGCTTC AGGAACGAGG TCGCGGAAGC CGTGCGGCGG CTGGAGGGGC AAGCGTCACG CGCGTGA
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Protein sequence | MTAAPADTMT ATARPDRADP SRAPAGRKSQ QRVQDILRAG REVFAEKGYE HATAAEIAQR VGVSEATVFS YFRGKRELCA RVIADWYDEI IAAFEHGMPV EASVQHQFAF IVRTHLRLML VNGTGLCALV LSEGRAKQHA LSDELTALQR RYTAPLMDVL ARGQAAGQVR RDMPLSLLRS MVFGPIEHVL WDAILGHRKL DTETTVTQLV DMLWAAVQPP APEQAALVRF RNEVAEAVRR LEGQASRA
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