| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4553 |
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| Symbol | |
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| ID | 4313445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1507177 |
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| End bp | 1508502 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638152392 |
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| Product | major facilitator transporter |
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| Protein accession | YP_776437 |
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| Protein GI | 115359299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.396858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTC TCGACGCGGC CGCAAGCCGC TCGCCCGCCG TGCCCGCCCA ATCGGCCGAG
CTCGACCGCA CCTACAAGAA AGTGTTCTGG CGCATCGTGC CGTTCCTGAT GCTCTGCTAC
GTGGTCGCGT ATCTCGACCG CGTGAACGTC GGCTTCGCGA AGCTGCAGAT GTCGCAGGAC
CTCGCGTTCA GCGAAACCGT GTTCGGCCTC GGCGCCGGCA TCTTCTTCCT CGGCTACTTC
CTGTTCGAGC TGCCGAGCAA CCTGCTGATG CACCGCCTCG GCGCGCGCAT CTGGATCGCG
CGGATCATGA TCACGTGGGG CCTGCTTTCG GCCGTGTTCG CGTTCGTCAG GACACCGACA
CAGTTCTACG TGCTGCGCTT TCTGCTCGGT CTCGCGGAAG CCGGCTTCTA TCCGGGCGTG
ATCCTGTACC TCACGTACTG GTTCCCGTCG CATCGCCGCG CGAAGATCAT CGCGGTGTTC
ATGTCGGCGA TTCCGGTGTC GGGCATCTTC GGCAACCCGC TGTCGGGCTG GATCATGGAA
CGCTTTCACG GCGGCTCCGG CTTTCACGGC TGGCAGTGGA TGTTCATGAT CGAGGCCGTG
CCGGCCGTGC TCGTCGGCAT CGCGACGATC CTGTATCTCG ACAACAGCAT CCGCGGCGCG
AAGTGGCTCG ACGAGCGCGA GAAGCAGCTG CTCGAGGATG AAATCGCCGC GCAGCCGCAG
GAACAGCACA AGCACGGCCA TTCGCTGAAA GCCGTGTTCG CCGACCCGCG CATGTGGTGG
ATGTCGCTGA TCTACTTCGC GTTCGTCACC GGCCAGTACG GCCTCACGTT CTGGATGCCG
ACGCTCGTCA AGTCGACCGG CATCACCGAT ACGCTGCAGA TCGGCCTGCT GTCGGCGATT
CCGTTCGTCG TCGCGATCGT CGTGATGAAC CTGTTCGGCC ACAGCGCGGA CAAGCACCGC
GAACGCCGCT GGCACCTGAT CGTGCCGGCG CTGATGGGCG CCGTCGGGTT TGCGGTCGCC
GCGTCGTACT CGCACAATAC GGCGGTGTCG ATCGTGTTCC TGTCGCTCGC GGCGGGCGGC
GTGCTGACCT GCGCACCGCT GTTCTGGTCG CTGCCGACCG CGTTCCTCGC CGGCTCCGCC
GCTGCCGCCG GGATCGCGAT CATCAACTCG GTCGGCAACC TCGCCGGGTT CGCGAGCCCG
TACGTGATCG GCTACCTGAA GGACCTCACG CACAGCACGT CGTCCGGCAT GTACGTGCTC
GCGTCAATGC TCGTGATCGG TGCGATCGCC GTGTGGCTCA CGCCCGCGAA ACTCGTGAAC
CGCTGA
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| Protein sequence | MTALDAAASR SPAVPAQSAE LDRTYKKVFW RIVPFLMLCY VVAYLDRVNV GFAKLQMSQD
LAFSETVFGL GAGIFFLGYF LFELPSNLLM HRLGARIWIA RIMITWGLLS AVFAFVRTPT
QFYVLRFLLG LAEAGFYPGV ILYLTYWFPS HRRAKIIAVF MSAIPVSGIF GNPLSGWIME
RFHGGSGFHG WQWMFMIEAV PAVLVGIATI LYLDNSIRGA KWLDEREKQL LEDEIAAQPQ
EQHKHGHSLK AVFADPRMWW MSLIYFAFVT GQYGLTFWMP TLVKSTGITD TLQIGLLSAI
PFVVAIVVMN LFGHSADKHR ERRWHLIVPA LMGAVGFAVA ASYSHNTAVS IVFLSLAAGG
VLTCAPLFWS LPTAFLAGSA AAAGIAIINS VGNLAGFASP YVIGYLKDLT HSTSSGMYVL
ASMLVIGAIA VWLTPAKLVN R
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