Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4546 |
Symbol | |
ID | 4313438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1499229 |
End bp | 1500473 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638152385 |
Product | sarcosine oxidase beta subunit family protein |
Protein accession | YP_776430 |
Protein GI | 115359292 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCT ACTCGATATT CAGCCTGTTC CGCAACGGCC TCTCGTATCA CGAGAACTGG GAAAAGCAGT GGAAGAGCCC GGAACCGAAG AAGGAATACG ACGTCGTGAT CGTCGGCGGC GGCGGCCACG GCCTCGCGAC CGCCTACTAC CTCGCGAAGG AGCACGGCAT CACGAACGTC GCGATCCTCG AGAAGGGCTG GATCGGCGGC GGCAACACCG CGCGCAACAC GACGATCGTG CGCTCGAACT ATCTGTGGGA CGAATCGGCC GCGCTGTACG AGAAGGCGAT GAAGCTGTGG GAAGGGCTGT CGCAGGATCT CAACTACAAC GTGATGTTCA GCCAGCGCGG CGTGATGAAC CTCGCGCACA CGCTGCAGGA CGTGCGCGAC ACCGAGCGCC GCGTGAACGC GAACCGGCTG AACGGCGTCG ACGCCGAATT CCTGACGCCC GCGCAGATCA AGGAAATCGA GCCGACGATC AACCTGAACA GCCGCTACCC GGTGCTCGGC GCATCGATCC AGCGCCGTGC GGGCGTCGCG CGTCACGACG CGGTGGCCTG GGGCTTCGCG CGCGGCGCGG ACCGCGCCGG TGTCGACATC ATCCAGAACT GCCAGGTGAC GGGCATTCGC CGCGAAGGCG GCGCAGTGGT CGGCGTCGAT ACGGTGAAGG GCTTCATCAA GGCGAAGAAG GTCGCGGTGG TCGCGGCCGG CAATACGACG ACGCTCGCCG ACATGGCCGG CGTGCGCCTG CCGATCGAAA GCCACCCGCT GCAGGCGCTG GTGTCCGAGC CGATCAAGCC GGTGGTCAAC TCGGTGATCA TGTCGAACGC GGTGCATGCG TACATCAGCC AGTCCGACAA GGGCGACCTC GTGATCGGCG CGGGTATCGA CCAGTACACG GGCTTCGGCC AGCGCGGCAG CTTCCACATC ATCGAAAGCA CGCTGCAGGC GATCGTCGAG ATGTTCCCGG TGTTCTCGCG CGTGCGGATG AACCGCCAGT GGGGCGGCAT CGTCGACGTG TCGCCGGACG CGTGCCCGAT CATCACCAAG ACCGACGTGA AGGGCCTGTA TTTCAACTGC GGCTGGGGCA CCGGCGGCTT CAAGGCGACG CCGGGCTCGG GATGGGTGTT CGCGCACACG ATCGCCCGCG ACGAACCGCA TCCGCTGAAC GCACCGTTTG CACTCGACCG CTTCTACACC GGCCATCTGA TCGACGAGCA CGGCGCTGCC GCCGTCGCGC ACTAA
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Protein sequence | MSRYSIFSLF RNGLSYHENW EKQWKSPEPK KEYDVVIVGG GGHGLATAYY LAKEHGITNV AILEKGWIGG GNTARNTTIV RSNYLWDESA ALYEKAMKLW EGLSQDLNYN VMFSQRGVMN LAHTLQDVRD TERRVNANRL NGVDAEFLTP AQIKEIEPTI NLNSRYPVLG ASIQRRAGVA RHDAVAWGFA RGADRAGVDI IQNCQVTGIR REGGAVVGVD TVKGFIKAKK VAVVAAGNTT TLADMAGVRL PIESHPLQAL VSEPIKPVVN SVIMSNAVHA YISQSDKGDL VIGAGIDQYT GFGQRGSFHI IESTLQAIVE MFPVFSRVRM NRQWGGIVDV SPDACPIITK TDVKGLYFNC GWGTGGFKAT PGSGWVFAHT IARDEPHPLN APFALDRFYT GHLIDEHGAA AVAH
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