| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4540 |
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| Symbol | |
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| ID | 4313432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1492900 |
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| End bp | 1494252 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638152379 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_776424 |
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| Protein GI | 115359286 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCATC GCCTGCGCGT GTCGACCGAC GGCTCGCCCG TCGGGCAACT GACCTACGAC
GCCGGTCGCG ACGATTACGG CTTTTCGTAC GACCCGGCGT GGCTCGCGCG TGGCGATGCG
TTCGCGTTAT CGCCGTGCAT TCCGCTCGAT GGCGGCAAGC CGCCGGCGGG CGCGGTCCAG
CGTTTCGTAG GCAACTTGCT GCCCGAGGGC CGCGCGCTCG ACGTGGCCGC ATCGATGTAT
CAGATATCGA AGGACAATGT CTTCGGCCTG ATCCGGATGC TCGGCAAGGA GCCGGTCGGC
GCGTTGAGCT TCATTCCTGA CGACGATTCG GCCGCGCGGG CGCCCGAAAG CCCCGAACCT
GTGCGTCGGC CGATTTCGGT GGAAGAGCTG ACCGATCGTA TCCGCAAGCG CGATGCGATC
CCGTTTGCCG TCTGGGACGA TCAGGTGCGC CTGTCGATCG CCGGTCATCA GGACAAACTG
CAGGTGCTCG TCGAGGGCGA GCAGTTCTCG CTCGTCGATG GCGCGCTCAG CAGCTCGCAT
ATTCTCAAGC CCGAGTCGCG TAGCCCGAAT GCGCCGTTCA TGGTCGCCAA CGAGCATTTC
TGCATGACGC TGGCGGCTCG CATGGGCCTG CCGGTCGCGC ATGTCGAGAT TCGGCGCATC
CCCGAACCGA TTCTGCTGAT CGAACGATTC GACCGGATCG TGACGACCGA CCCGGCCGAT
CCGCACCGCG TGAGCGCGGT GCGGCGACTT CATATCATCG ATGGGTGCCA GGCCCTCGAT
TTACCGGCGA CGCTCAAGTA CGAGCGCAAT CTCGGTAACA ACGAGGACGT ACGCAATATC
CGTGAAGGCG TGAGCTTCGA GCGACTGTTC TCGTTGACGC CGTCGCTCGA GACGCCGGCC
GCCGCGCGTT CGGCCATGCT GCGCTGGGCA TTGTTGCAAC TGCTGATCGG CAACAGCGAC
GCGCATGGCA AGAACATTTC GTTTTTCGTC AGCAGCGGCG GGCTCGATCC GGCGCCGCTG
TACGATCTGG TCTGCGTGAA CGTGTACGGA GACGCCTATG TACAAGACAT GGCGATGGCG
TACGGAGACG TGTTCCGTAC CGAGGAGCTG ACCGCTTTCG CGCTCGCAGA CTTCGCACAT
CGTGCGCAGA TCCGGCCGGC ACTCGTTGCA CGCGAAATGA CGCGGATGGC AACCCTGGCT
GCGAAGCTGG CTTCCGAGCT GGCGCAATCG GACATCTATG CGGGCGACGA GCAGGCATGG
GTGCGCCGTA TTTCGGAGTA CGTTCGGGAT CAGGCCGATC GGGTGCTTCG CATTGCACCC
ATGGTGCCCA AGGTCAACGT GGAACTGCTC TGA
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| Protein sequence | MVHRLRVSTD GSPVGQLTYD AGRDDYGFSY DPAWLARGDA FALSPCIPLD GGKPPAGAVQ
RFVGNLLPEG RALDVAASMY QISKDNVFGL IRMLGKEPVG ALSFIPDDDS AARAPESPEP
VRRPISVEEL TDRIRKRDAI PFAVWDDQVR LSIAGHQDKL QVLVEGEQFS LVDGALSSSH
ILKPESRSPN APFMVANEHF CMTLAARMGL PVAHVEIRRI PEPILLIERF DRIVTTDPAD
PHRVSAVRRL HIIDGCQALD LPATLKYERN LGNNEDVRNI REGVSFERLF SLTPSLETPA
AARSAMLRWA LLQLLIGNSD AHGKNISFFV SSGGLDPAPL YDLVCVNVYG DAYVQDMAMA
YGDVFRTEEL TAFALADFAH RAQIRPALVA REMTRMATLA AKLASELAQS DIYAGDEQAW
VRRISEYVRD QADRVLRIAP MVPKVNVELL
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