Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4527 |
Symbol | |
ID | 4313419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1479949 |
End bp | 1480887 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152366 |
Product | LysR family transcriptional regulator |
Protein accession | YP_776411 |
Protein GI | 115359273 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.343199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGGAT GCGCAGGCAT CGACCACCCG ACTTCCTCCA TGCCGCGCGA CAACTTTGCC GACCTGCTCG CCTTCATCGC CGTCGCGCGC GAGCGCAGCT TCACGCGCGC CGCCGCCCGG CTCGGCGTGT CGCAATCCGC ACTCAGCCAT ACGATCCGCG CGCTCGAGAC GCGTCTCGGC GTGCGGCTGC TCACACGCAC GACACGCAGC GTGGCGCCGA CCGAAGCCGG CGAGCGCCTG CTGCAGAATC TCGCGCCGCG CTTCGACGAA ATCGAGGACG AACTGTCGGC GCTCGCCGAG CTGCGCGACA AGCCGGCCGG CACCGTGCGC ATCAACGCGA CCGACTACGT GATCCGCACG CTGCTGTGGC CGCGGCTGTC GCCGATCCTG CGCGACTACC GCGACCTGAA GGTCGAGTTC GTGACCGACT ACGGGCTGTC CGACATCGTC GCGCAACGCT TCGACATCGG CGTGCGGCTC GGCGACCAGG TCGCAAAGGA CATGATCGCG GTACGCATCT CGCCCGACCT CAAGATGGCG ATCGTCGGCG CGCCCGCGTA TTTCGCGGAA CGCGAGCCGC CGGCGACGCC GCAGGATCTC GTCGCGCACG ACTGCATCAA CCTGCGCCTG CCGACGCACG GCGCGCTGTA CGCGTGGGAA CTCGCGCGCG GCGACGACAC GCTGCAGGTG CGCGTCGACG GCCAGGTCAC GTTCAACGGC ACCTATGAAA TGCTCGACGC CGCGCTCGCC GGCTACGGCC TCGCCTACGT GCCGGCCGAA CTCGCCGCGC CGCACGTCGA AGCCGGCCGG CTCGTCAGCG TGCTCGACGA CTGGTGTCCG ACATTCCCCG GCCATCACCT GTACTACGCG AGCCGGCGGC AATCGTCTCG TGCATTCGCG CTGATCGTGG ATGCACTGCG CCATCCCGGC CATTCATGA
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Protein sequence | MVGCAGIDHP TSSMPRDNFA DLLAFIAVAR ERSFTRAAAR LGVSQSALSH TIRALETRLG VRLLTRTTRS VAPTEAGERL LQNLAPRFDE IEDELSALAE LRDKPAGTVR INATDYVIRT LLWPRLSPIL RDYRDLKVEF VTDYGLSDIV AQRFDIGVRL GDQVAKDMIA VRISPDLKMA IVGAPAYFAE REPPATPQDL VAHDCINLRL PTHGALYAWE LARGDDTLQV RVDGQVTFNG TYEMLDAALA GYGLAYVPAE LAAPHVEAGR LVSVLDDWCP TFPGHHLYYA SRRQSSRAFA LIVDALRHPG HS
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