Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4524 |
Symbol | |
ID | 4313416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1476304 |
End bp | 1478073 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152363 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_776408 |
Protein GI | 115359270 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCCG AATTATTCGC GCAGCATCAT GATTGCCCGG GCTGGGAAGG CGAAATGGCC CGGCGCGTCG CTGCCTTCGA CTGGTCGTCC ACCGGCCTCG GCCCGCTCGA CGGCTGGTCG GCGAGCCTCG TCGCTGCCGT GCGCACCGTG CTCGCGTCGC CGCTGCCGCT GGTGATGCTG TGGGGCCGGC CCGGCTACAT GATCTACAAC GACGCGTATG CCGGGTTCGC CGGCGGGCGC CACCCCTATC TGCTCGGCCA GCCGGTCGAG CTCGGCTGGC CCGAGGTCGC CGAGTTCAAC CGGAACGTGA TGAACACCTG CCTCGCCGGC GGCACGCTGT CGTATCGCGA CAAGGAGCTC GTGCTGCTGC GCAGCGGGCG CCCCGAAGAC GTATGGATGG ATCTGCACTA CAGCCCGCTG CCCGACGACG ATGGCGCACC GGGCGGGGTG CTCGCCGTCG TGATCGAGAC GACCGAACGC GTGCTCGCCA CGCGTCATCG CGAACAGGCG GAAGCGGCGC TGCAGTCGTC CAACGATGCG CTGCGCCGCC TGACCGAAAC GCTCGAGCAA CGCGTGGCCG ATGCGATCGC CGAGCGCGCG GCGGTCGAGG AGCAGTTGCG CCACTCGCAG AAGATGGAAG CGATCGGCAG CCTGACCGGC GGCATCGCGC ACGACTTCAA CAACGTGCTG CAGGTGATCA GCGGCAACCT GCAGATTCTG GCCGTCGAGC TCGGCGAGCG CGCGAGCGCG CAGCCGCGAA TCGAAAGCGC GAACAACGCG GTGCGGCGCG GCGCGCAACT GGCGTCGCAC CTGCTGGCCT TCGCGCGCCG CCAGCCGTTG TCGGCGACGG TGCTCAATCC GCATCAGTTG ATCCACGGGA TGAGCGAGAT GCTGCACCGC GCGCTCGGCG AAACCGTGCG GATCGTCACC GCGCTGGCGC CCGACGTCGG CAACGTGCTC GCCGACCGGC ACCAGCTCGA GAACGCGCTG CTCAATCTTG CGATCAATGC GCGCGACGCG ATGAGCGGCG ACGGCACGCT GACGATCGCC GCGTACAACG ACGCGCATCC CACGCAGGCC GGCGGCGCAC GGCGCTCGCC ATTGCCGGCC GGCGAATACG TGACGTTCGA GATCAGCGAT ACGGGGGCCG GCATGACGGC CGACGTGCTC GAGCGCGTGT TCGAACCGTT CTTCACGACC AAGCCGGACG GCGAAGGCAC CGGGCTCGGG CTGAGCATGG TGTTCGGTTT CGTCAAGCAA AGCGGCGGCC ATACGTCGAT CGAAAGCACG CCGGGCCAGG GCACGACCGT GCGGCTCACA TTTCCGCGCT GTCACGACGA CTGCGCGGAA GAGCCTGCCC GCGTGCCGCA GCACGATGCC GCGCGCGGCC GCGAAACCAT CCTGGTCGTC GAGGACGACG CGGAGGTCCG GCTGACCGTG GTCGACATGC TTACGCAGCT CGGCTACAAG GTGCTGACCG CGTCCGACGG CGAAGCCGCG CTGCAGATAC TCGACTGCGA CGCGCATATC GACCTGCTGT TTACCGACGT GATCATGCCG GGCCGCATCA AGGGCGGCGA ACTCGCGCGC CGCGCCGCGC AGCGCACGCC GCCGTTGCCG GTGCTGTTCA CGTCCGGCTA CACGCGCGAC GAGATTTTCC ACTCCGGGCG GCTCGACCCC GGCGTCATGC TGCTCGGCAA GCCGTACCGC CGCGACGAAC TCGCGGCCCG GATCCGCGAC ATGCTCGACG CGCATCCAAA GGCGGCGTGA
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Protein sequence | MHAELFAQHH DCPGWEGEMA RRVAAFDWSS TGLGPLDGWS ASLVAAVRTV LASPLPLVML WGRPGYMIYN DAYAGFAGGR HPYLLGQPVE LGWPEVAEFN RNVMNTCLAG GTLSYRDKEL VLLRSGRPED VWMDLHYSPL PDDDGAPGGV LAVVIETTER VLATRHREQA EAALQSSNDA LRRLTETLEQ RVADAIAERA AVEEQLRHSQ KMEAIGSLTG GIAHDFNNVL QVISGNLQIL AVELGERASA QPRIESANNA VRRGAQLASH LLAFARRQPL SATVLNPHQL IHGMSEMLHR ALGETVRIVT ALAPDVGNVL ADRHQLENAL LNLAINARDA MSGDGTLTIA AYNDAHPTQA GGARRSPLPA GEYVTFEISD TGAGMTADVL ERVFEPFFTT KPDGEGTGLG LSMVFGFVKQ SGGHTSIEST PGQGTTVRLT FPRCHDDCAE EPARVPQHDA ARGRETILVV EDDAEVRLTV VDMLTQLGYK VLTASDGEAA LQILDCDAHI DLLFTDVIMP GRIKGGELAR RAAQRTPPLP VLFTSGYTRD EIFHSGRLDP GVMLLGKPYR RDELAARIRD MLDAHPKAA
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