| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4512 |
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| Symbol | |
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| ID | 4313404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1464829 |
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| End bp | 1466529 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152351 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_776396 |
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| Protein GI | 115359258 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.422466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC GCGAATACGA CTACATCATC TGCGGCGCCG GTTCCGCGGG CAACGTGCTC
GCGACGCGCC TGACGGAAGA TCCGAACGTC ACGGTGCTGC TGCTCGAAGC GGGCGGCCCC
GACTACCGCT TCGACTTCCG CACGCAGATG CCGGCGGCGC TCGCCTATCC GCTGCAGGGC
CGTCGCTACA ACTGGGCCTA CGAGACCGAC CCCGAGCCGC ACATGGACAA CCGCCGGATG
GAATGCGGCC GCGGCAAGGG GCTCGGCGGC TCGTCGCTGA TCAATGGGAT GTGCTACATC
CGCGGCAACG CGCTCGACTA CGACAACTGG TCGACGCACA AGGGGCTCGA GAACTGGACC
TATCTCGACT GCCTGCCGTA CTTCAAGAAG GCCGAGACGC GCGACGTCGG CCCGAACGAC
TATCACGGCG GCAACGGCCC CGTGTCGGTC ACGACCAGCA AGCCGGGCGC GAACCCGCTG
TTCGAGGCGA TGGTCGATGC GGGCGTGCAG GCCGGCTATC CGCGCACCGA CGACCTGAAC
GGCTATCAGC AGGAAGGCTT CGGCCCGATG GACCGCACCG TCACGCCGAA GGGCCGCCGC
GCCAGCACCG CGCGCGGCTA CCTCGACCAG GCGAAGGGGC GGCCGAACCT CGAGATCGTC
ACGCACGCGC TCGCCGACCG CATCCTGTTC GACGGCAAGC GCGCGTCGGG CGTCACGTAC
CTGCGCGGCA GCGAGCGCGC GAGTGCGCAC GCGCGCCGCG AGGTCCTCGT GTGCAGCGGC
GCGATCGCGT CGCCGCAACT GCTGCAACGC TCGGGCGTCG GCCCCGGCGC ATGGCTGAAG
GAACTCGACA TCCCGATCGT GCTCGACCTG CCCGGCGTCG GCCAGAACCT GCAGGATCAC
CTGGAGATGT ACATCCAGTA CGAGTGCAAG GAGCCGGTGT CGCTGTATCC GGCGCTCAAG
TGGTGGAACC AGCCGAAGAT CGGCCTCGAA TGGATGCTGA ACGGCACGGG CCTCGGCGCG
AGCAACCACT TCGAGGCGGG CGGCTTCATC CGCACGCGCG ACGACGATCC GTGGCCGAAC
ATCCAGTATC ACTTCCTGCC CGTTGCGATC AACTACAACG GCTCGAACGC GATCGAGATG
CACGGCTTCC AGGCGCACGT CGGGTCGATG CGTTCGCCGA GCCGCGGCCG CGTGAAGCTG
CGCTCGCGCG ATCCGAACGC GCACCCGAGC ATCCTGTTCA ACTACATGGC CGAAGCGCTC
GACTGGCGCG AGTTCCGCGA TGCGATCCGC GCGACGCGCG AGATCATGCG GCAGCCCGCG
CTCGACCGCT ATCGCGGCCG CGAGCTGAAC CCGGGCGCCG ACTGCAAGTC CGACAAGGAG
CTCGACACGT TCGTGCGGGC CCGCGCGGAA ACCGCGTTCC ATCCGTCGTG CTCGTGCAAG
ATGGGCTACG ACGACATGGC CGTGGTCGAC GAGGAAGGTC GCGTGCATGG GCTGGAAGGG
CTGCGCGTCG TCGATGCGTC GATCATGCCG ATCATCACGA CCGGCAACCT GAACGCGCCG
ACGATCATGA TCGCGGAGAA GATCGCCGAC AAGATCCGTG GCCGCCAGCC GCTCGCGCGT
GTCGACGTGC CTTACTTCGT CGCGAACGGA GCGATGGCGC GCAATGTCGC GAAGGCGGTG
CGGCAGCCGG AAACGGTGTA A
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| Protein sequence | MTTREYDYII CGAGSAGNVL ATRLTEDPNV TVLLLEAGGP DYRFDFRTQM PAALAYPLQG
RRYNWAYETD PEPHMDNRRM ECGRGKGLGG SSLINGMCYI RGNALDYDNW STHKGLENWT
YLDCLPYFKK AETRDVGPND YHGGNGPVSV TTSKPGANPL FEAMVDAGVQ AGYPRTDDLN
GYQQEGFGPM DRTVTPKGRR ASTARGYLDQ AKGRPNLEIV THALADRILF DGKRASGVTY
LRGSERASAH ARREVLVCSG AIASPQLLQR SGVGPGAWLK ELDIPIVLDL PGVGQNLQDH
LEMYIQYECK EPVSLYPALK WWNQPKIGLE WMLNGTGLGA SNHFEAGGFI RTRDDDPWPN
IQYHFLPVAI NYNGSNAIEM HGFQAHVGSM RSPSRGRVKL RSRDPNAHPS ILFNYMAEAL
DWREFRDAIR ATREIMRQPA LDRYRGRELN PGADCKSDKE LDTFVRARAE TAFHPSCSCK
MGYDDMAVVD EEGRVHGLEG LRVVDASIMP IITTGNLNAP TIMIAEKIAD KIRGRQPLAR
VDVPYFVANG AMARNVAKAV RQPETV
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