Gene Bamb_4509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4509 
Symbol 
ID4313401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1461095 
End bp1461997 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID638152348 
Productalpha/beta hydrolase fold 
Protein accessionYP_776393 
Protein GI115359255 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.273476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCG AAAAACACGT GGTCCCGCTG CCGAATGGTC TGAAGGTCTA CGTCGAACGG 
AACGTGTTCG ATCCGTCATT CGACACGGCG ATGCTCGTCA ACGGCGCGCT CGCGACGACC
GCGTCGTTCG GCCAGACCGT CCAGTATCTC GGCGAGCGGA TGAACACGAT CTGCTTCGAC
CTGCCGTACG CCGGGCAGTC GCGCCAGCAC AACCCCGGCT GCTTCATCCT GACGAAGGAC
GACGAGGCCG CGATCCTCCA GCATCTGGTC GAGCACTTCG CGCCCGCGTT CCTCGTGTCG
GTGTCGTGGG GCGGCGTCGC GTCGCTGTTC GCGCTCGCGC GCGGGTGCCC GAGCGTGCGG
CGCGCGGCGA TCTGTTCGTT CTCGCCGTTC CTGAACGACG CGATGGTCGA CTACGTGACG
CGCGCCCGCG ACCACATCGC GGCCGGCGAG AACCTGAAGG CCGCGCAGCT GCTGAACGAC
ACGGTCGGCC GCTACCTGCC GCGCATCATG AAGCTGTACA ACTACCGCTA CCTGACGCGC
CTGCCGCGCG ACGAGCAGGA TCAGGTCGCG TTCCACGTCG ACCAGATCCT GTCGCTGCAG
CCGGAGCGTT ACCTGAGCGA GTTCTCGAAC ATCGGCGCCG AACTGCTGTT CGTGAACGGC
GAGCGCGACG AATACACGAC GCCGGCCGAC GTCCGCCAGC TCGCCGCGCA CGTGCCGCGT
GCGCGCTTCG GGACGATTCC CGACGCCGGT CATTTCCTCG ACATCGAAGG CCGCGCGCAG
CGCGAGGCCA CGCGTGCCGC GCTGCTCGGC TTCTTCTGCG ACGCGCCGCC CGTTGCCGCG
GGCGTCGGGC TCGGCGCCGC TCACCCGTGC GTGTCCGCGC CGATGCCGGC CATGTCGTCG
TGA
 
Protein sequence
MPTEKHVVPL PNGLKVYVER NVFDPSFDTA MLVNGALATT ASFGQTVQYL GERMNTICFD 
LPYAGQSRQH NPGCFILTKD DEAAILQHLV EHFAPAFLVS VSWGGVASLF ALARGCPSVR
RAAICSFSPF LNDAMVDYVT RARDHIAAGE NLKAAQLLND TVGRYLPRIM KLYNYRYLTR
LPRDEQDQVA FHVDQILSLQ PERYLSEFSN IGAELLFVNG ERDEYTTPAD VRQLAAHVPR
ARFGTIPDAG HFLDIEGRAQ REATRAALLG FFCDAPPVAA GVGLGAAHPC VSAPMPAMSS