| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4506 |
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| Symbol | |
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| ID | 4313398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1457582 |
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| End bp | 1459174 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152345 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_776390 |
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| Protein GI | 115359252 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.228194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGG CATCGTCGAT TCAGCATGCA TCGGCGCCCG CCGCTTTCGA CGCGGTCGCG
GCGGCGCCTG CCGCGGCACC GGTGCGTGGC GCCCGGCTCG CGCTCCTGAC GTTCGCGCTG
TCGCTCGCGA CCTTCATCGA AGTGCTCGAC TCGACCGTGA CGAACGTCGC GGTGCCGGCA
ATCTCCGGCA GTCTCGGTGT GTCGAACAGC CAGGGCACGT GGGTGATCAG CTCGTATTCG
GTCGCGGCCG CGATCGCGGT GCCGCTGACC GGCTGGCTCG CGCGCCGCGT CGGCGAGCGG
CGGCTGTTCA TCGGCGCGGT GCTGCTGTTC ACGCTGACGT CGCTGCTGTG CGGGCTCGCA
CGCGACCTGC ACGTGCTGGT GGTCTGCCGC GCATTGCAGG GGCTGTGCTC GGGGCCGATG
GTGCCGCTGT CGCAGACGAT CCTGCTGCGC ACCTTCCCGC CGGACAAGCG CACCGTCGCG
CTCGCGCTGT GGGCGATGAC GGTGCTGCTT GCGCCGATCT TCGGGCCGGT GGTCGGCGGC
TGGATCGTGG ACAGCTTCTC GTGGCCGTGG ATCTTCCTGA TCAATCTGCC GATCGGGCTG
TTCTCGTTCG CCGTGTGCAC CGCGATGCTG CGCCCCGACG CGCAGCGCGG CGCGGCCGGC
CCGATCGACG TGCCGGGCAT CGTGCTGCTC GTGATCGGCG TCGGCTCGCT GCAGGCGATG
CTGGATCTCG GTCACGACAA GGGCTGGTTC GATTCGCCGC TGATCGTCAC GCTCGCGGTG
GTTGCCGGGC TTGCGATCGT GTCGCTGCTG ATCTGGGAGG CGGGCGAAGC GCATCCGGTC
GTCGACCTGA GCCTGTTTCG CGACCGCACG TTTTCGTTCT GTGTGCTGAT CATCTCGCTC
GGGATGATCA GCTTCTCGGT GGTGGGCGTC GTGTTTCCGC TGTGGATGCA GGCGGTGATG
GGCTACAACG CGTTTCACGC GGGCCTCGCC ACCGCCTCGC TCGGCGTGCT CGCGCTCGTG
TTCTCGATTC TCGTCGGCCT GCATGCGCAC CGCTTCGATG CACGCGTGCT CGCGACGTTC
GGCTTCCTCG TGTTCGCGGC CGTGCTCGCG TGGGACGCGC ATTTCACGCT GAAGATGACA
TTCGCGCAGA TCGCCGCGCC CGGGCTGATC CAGGGGATCG GGCTGCCGTG CTTCTTCATT
CCGCTGACGG CCGCGACGCT GTCGCGCATT CCGGACGACC GGCTCGCGGC CGCGTCGAGC
CTGTCGAACT TCCTGCGCAC GCTGTCCGCC GCGTTCGGCA CCGCGATGAG CGTGACGCTG
TGGGACAACC GCGCGACCTA TCACTACGAC GTCGTGTCGC AATCGGTCAC GCACGCATCG
ACGAACACGC AGCGCTTCGT GCACACGCTG AACGGGATGG GCGTGGATGG CGTGCGCGAG
CTATCCACGC TGCACCAGGT CGTGATGCAG CAGGCGTACA TGATGGCGAC GGGCGACATG
TTCTGGATGG CGAGCATGAC CTGCATCGTG CTCGCCGCGA TGATGTGGCT GACGCGGCCG
AAGCGCGGCG CCGCGGTTTC GCTCGGACAT TGA
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| Protein sequence | MSTASSIQHA SAPAAFDAVA AAPAAAPVRG ARLALLTFAL SLATFIEVLD STVTNVAVPA
ISGSLGVSNS QGTWVISSYS VAAAIAVPLT GWLARRVGER RLFIGAVLLF TLTSLLCGLA
RDLHVLVVCR ALQGLCSGPM VPLSQTILLR TFPPDKRTVA LALWAMTVLL APIFGPVVGG
WIVDSFSWPW IFLINLPIGL FSFAVCTAML RPDAQRGAAG PIDVPGIVLL VIGVGSLQAM
LDLGHDKGWF DSPLIVTLAV VAGLAIVSLL IWEAGEAHPV VDLSLFRDRT FSFCVLIISL
GMISFSVVGV VFPLWMQAVM GYNAFHAGLA TASLGVLALV FSILVGLHAH RFDARVLATF
GFLVFAAVLA WDAHFTLKMT FAQIAAPGLI QGIGLPCFFI PLTAATLSRI PDDRLAAASS
LSNFLRTLSA AFGTAMSVTL WDNRATYHYD VVSQSVTHAS TNTQRFVHTL NGMGVDGVRE
LSTLHQVVMQ QAYMMATGDM FWMASMTCIV LAAMMWLTRP KRGAAVSLGH
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