| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4500 |
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| Symbol | |
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| ID | 4313392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1449802 |
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| End bp | 1451220 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152339 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_776384 |
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| Protein GI | 115359246 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.705718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAT ATGCGGCGCT CGCGCAGACG ATTGCGGACT CGATCAGGCG TGGCGACCTC
GCGGCCGGCG CGCGGATCCC GACCGTGCGC TCGGCGTGCC GCGCCTATCG TGTGAGTCCT
TCCACCGTGT TTCGCGCGTA CTACACGCTC GAAAGCGAGG GCCTCATCGT CGCGCGCGCG
CGTTCCGGGT ATTTCGTCGC GGATCTCGAC GACAAGCGAG TACGTACCAG CCAGGACACG
CCACGCAAGC CGGGCGCGTC GCCGACTGGC GACGACACCC TGTTCCGCTT GATGGACTCG
CTCAAGCGCG ACGACATCGT GCCGCTAGGT TCGGCATTCG CCAGCTATTC ACTGTTTCCG
ATGAGCAGCC TGTGGCGCTA TGCGGCCACG GCGGCCCGCA ACATGGACCG CGCGCAACTG
CTGGCGGGAC TGCCGCCGGG CCACGAAGCG CTGCGCCGCC AGATCGCCAT GCGCTACCTG
AACGCGGGCG CCGCATTGCC GATGGAAGAG ATCGTCATCA CGACCGGCGC GGCCGAAGCG
CTGACGCTGA GCCTGCAGGC ACTCACGCGC CCCGGCGACA TCGTCGCGAT CGAACGCCCG
GCCTTCCCCG CGGTGTTGCA GGCCGTGCAG CGGCTGCATC TGAAGACCGT CGAGATCCCG
GTCGACCCGC GCGCCGGCCT CGATCTCGAC GCACTCGCCG ATGCGCTGGA CACGCATCCG
GTGCGCGCGT GCTGGTTCAT GACCTCGCTT CACAACCCGA CCGGCGCGAC GCTGTCCGAC
GAGCGCAAGC GCGCGCTGAT CGACCTGCTC GCGTCGCACG AGGTGCCGCT GATCGAGGAC
GACGTGTTCG GCGAACTGCA TTTCGGGCCG TTGCCCACGC GCCCCGCGAA ACTGTACGAC
GATAGCGGGC TGGTGCTGCA TTGTGGGTCG TTCTCGAAGT GCCTCGCTCC CGGTTTCCGG
GTCGGCTGGG TCGCGGCCGG ACGCTACGTG GAACAGATCA GCCACGTGAA GAACGAAAGC
GCGCCGGCCG CCGACGTGCC CGCGCAGATG GCCGTATCGA GCTACCTGCG CGACGGCGCG
TACGACCGCT TCCTGCGCCG GCTCCGGCGC AACCTGGCCG CGCACCAGGC GCAGATGCTG
GCCGCCGTTC GCGCGTACTT TCCGCCCGAC ACGGAGGTGT ACGCACCGCG CGGCGGGTAT
TTCCTGTGGA TCGAATTGCC GCCGCACGTG GACGCGATGC AGTTGTTCGA CGACGCGATG
GACAACGGCG TCAGCCTCGC GCCCGGGCCG ATCTTTTCCG TGACGGGCGC ATTTCACCGT
TATGTCCGGC TGAACTATGG CCGCCCCTGG ACCCCTGCCG TCGAAGACGC GATGCGGACC
ATCGGGACGC TCGCCGGGCG GCAACGACAG ACGAGGTAG
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| Protein sequence | MKRYAALAQT IADSIRRGDL AAGARIPTVR SACRAYRVSP STVFRAYYTL ESEGLIVARA
RSGYFVADLD DKRVRTSQDT PRKPGASPTG DDTLFRLMDS LKRDDIVPLG SAFASYSLFP
MSSLWRYAAT AARNMDRAQL LAGLPPGHEA LRRQIAMRYL NAGAALPMEE IVITTGAAEA
LTLSLQALTR PGDIVAIERP AFPAVLQAVQ RLHLKTVEIP VDPRAGLDLD ALADALDTHP
VRACWFMTSL HNPTGATLSD ERKRALIDLL ASHEVPLIED DVFGELHFGP LPTRPAKLYD
DSGLVLHCGS FSKCLAPGFR VGWVAAGRYV EQISHVKNES APAADVPAQM AVSSYLRDGA
YDRFLRRLRR NLAAHQAQML AAVRAYFPPD TEVYAPRGGY FLWIELPPHV DAMQLFDDAM
DNGVSLAPGP IFSVTGAFHR YVRLNYGRPW TPAVEDAMRT IGTLAGRQRQ TR
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