Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4495 |
Symbol | |
ID | 4313387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1443623 |
End bp | 1444156 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638152334 |
Product | 4-vinyl reductase, 4VR |
Protein accession | YP_776379 |
Protein GI | 115359241 |
COG category | [R] General function prediction only |
COG ID | [COG1719] Predicted hydrocarbon binding protein (contains V4R domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.132465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACCGC AACTGCCGAT CAACGTCGAT CCCGATACCG GCGTCTGGAC CACCGACGCG CTGCCGATGC TGTACGTGCC GCGCCACTTC TTCACGAACA ATCACGTCGC CGTCGAGGAA GCGCTCGGCG TCGACGCGTA TGCCGAGATC CTCTACAAGG CCGGCTACAA GTCCGCATAC CACTGGTGCG ACAAGGAAGC GAAGCTGCAC GGGCTGACCG GCATGGCTGT GTTCGAGCAC TACCTGAAGC GCCTGTCGCA ACGCGGCTGG GGCCTGTTCT CGATCATCGA GGCCGACCCG GCCAGCGCGC GCGCGAAGAT CGAGCTGCGC CACTCGTCGT TCGTGCTCCA GCAGCCGGGC AAGGAAGGCA AGCTCTGCTA CATGTTCGCG GGCTGGTTCG CTGGCGCAAT GGACTGGGTC AACGACACGA CGCCGGAAGG CAAGGGCGCG CCGCGTGCGC AGTCGAAGGA AGTGCAGTGT GCGGCCGAGC ATCACGACCA CTGCGTCTTC GAAGTGTCGC CGCTCGCGCA CTGA
|
Protein sequence | MQPQLPINVD PDTGVWTTDA LPMLYVPRHF FTNNHVAVEE ALGVDAYAEI LYKAGYKSAY HWCDKEAKLH GLTGMAVFEH YLKRLSQRGW GLFSIIEADP ASARAKIELR HSSFVLQQPG KEGKLCYMFA GWFAGAMDWV NDTTPEGKGA PRAQSKEVQC AAEHHDHCVF EVSPLAH
|
| |