Gene Bamb_4495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4495 
Symbol 
ID4313387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1443623 
End bp1444156 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content65% 
IMG OID638152334 
Product4-vinyl reductase, 4VR 
Protein accessionYP_776379 
Protein GI115359241 
COG category[R] General function prediction only 
COG ID[COG1719] Predicted hydrocarbon binding protein (contains V4R domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.132465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGC AACTGCCGAT CAACGTCGAT CCCGATACCG GCGTCTGGAC CACCGACGCG 
CTGCCGATGC TGTACGTGCC GCGCCACTTC TTCACGAACA ATCACGTCGC CGTCGAGGAA
GCGCTCGGCG TCGACGCGTA TGCCGAGATC CTCTACAAGG CCGGCTACAA GTCCGCATAC
CACTGGTGCG ACAAGGAAGC GAAGCTGCAC GGGCTGACCG GCATGGCTGT GTTCGAGCAC
TACCTGAAGC GCCTGTCGCA ACGCGGCTGG GGCCTGTTCT CGATCATCGA GGCCGACCCG
GCCAGCGCGC GCGCGAAGAT CGAGCTGCGC CACTCGTCGT TCGTGCTCCA GCAGCCGGGC
AAGGAAGGCA AGCTCTGCTA CATGTTCGCG GGCTGGTTCG CTGGCGCAAT GGACTGGGTC
AACGACACGA CGCCGGAAGG CAAGGGCGCG CCGCGTGCGC AGTCGAAGGA AGTGCAGTGT
GCGGCCGAGC ATCACGACCA CTGCGTCTTC GAAGTGTCGC CGCTCGCGCA CTGA
 
Protein sequence
MQPQLPINVD PDTGVWTTDA LPMLYVPRHF FTNNHVAVEE ALGVDAYAEI LYKAGYKSAY 
HWCDKEAKLH GLTGMAVFEH YLKRLSQRGW GLFSIIEADP ASARAKIELR HSSFVLQQPG
KEGKLCYMFA GWFAGAMDWV NDTTPEGKGA PRAQSKEVQC AAEHHDHCVF EVSPLAH