Gene Bamb_4493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4493 
Symbol 
ID4313385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1439557 
End bp1441482 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content70% 
IMG OID638152332 
Producthypothetical protein 
Protein accessionYP_776377 
Protein GI115359239 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGT CCTTCCTCAT TACCGCACTG TTGTGGCTGT CGGTGGCGGG GCTCGCGTTC 
GCGGTCGCGA AGCGCTCGTC CTACTGGCGT CTCGGCCGGG CCACGGCGCC CGGCTCGTTC
GGCGTCGCGA ACCTGTTCGC GATTCCGAAG CGCTACTTCG TCGACCTGCA CCACGTGGTC
GCCCGCGACC CGTACATCGC GAAGACCCAC GTCGCCACCG CCGGCGGCGC GATCGGTGCG
CTCGCGCTGG TGTTCGTCAA CTACGGCCTC GCGATCTACT CGCCGTGGCT CGACAAGCTG
ATCTTCCTCG CGGCGCTCGC GATGCTCGTC GGCGTGGTGT TCGTCTGGCG CCGCCGCGCG
GCGAAGAACG TGCCGGCCCG CCTGTCGCGC GGCCCGTGGA ACGCGCTGCC CTGGCTGCTC
GGCTCGTTCG CGCTCGGCCT GGTGCTGTTC ATGGTCGTGC CGACCGGCGC GATGTCGGGA
GCGTTCGCGG TGCTCTGCGC GCTGCTGATC GGCGCCGGCG CATTCACGAT GACCATCGGC
GCCGCGAAGG GCGGCCCGAT GAAGCATGCG ATCGCCGGCC TGCTGCACCT CGCGTTCCAC
CCGCGCCAGG AGCGTTTCGC GGCTACCCGC GACTCGTTCA CGGGCAACGG CACGGCCACG
CCGCCGACCG CGCTGAAGCT GCCGGACATC GAGCACGAGG AATACGGCGT CGCGAAGCCG
GTCGAATTCC GCTGGAACCA GCTGCTGAGC TTCGACGCGT GCGTGCAGTG CGGCAAGTGC
GAGGCCGCGT GCCCCGCGTT CGCCGCGGGC CAGCCGCTGA ACCCGAAGAA GCTGATCCAG
GATCTCGTCG TCGGGATGGC GGGCGGCACC GATGCGGCCT ACGCGGGCAG CCCGACGCCG
GGCCTCGCGG TCGGCCAGCA TCGCGGCGAG CCGAACGGCC CGATCGTGTC CGGCCTGATC
GAGGAACAGA CGCTGTGGTC GTGCACGACC TGCCGCGCAT GCGTGCAGGA ATGCCCGATG
CTGATCGAGC ACGTCGACGC GATCGTCGAC ATGCGCCGCA ACCGCACGCT GGTGCACGGT
ACGGTGCCGG GCAAGGGCCA GGAAGTGCTC GCGAACCTGC GCGAGACCGG CACGATGGGC
GGTTACGACG CAGCCGCGCG CTACGACTGG TCGGTCGATC TGAGCGCACC CGTCGCGCAA
CCCGGCAAGC CGGTCGACGT GCTGTTCGTC GCGGGTGAAG GCGCGTTCGA CATGCGTTAC
CAGCGCACGC TGCGCGCGTT CGTGAAGGTG CTGAACAAGG CAGGCGTCGA CTACGCGGTG
CTCGGCGGGA CCGAGACCGA TACCGGCGAC GTCGCACGGC GCCTCGGCGA CGAAGCGACG
TTCCAGCGGA TGGCGAAGCG CCTGATCGGC ACGCTCGGCA CGCTGTCGTA CAAGCAGATC
GTGACGGCCG ACCCGCACGT GATGCACAGC CTGCGCAACG AATACCGCGC GCTCGGGCTG
CGCGTGACGG TCAAGCATCA CACGACCTAC CTCGCAGAGC TGGCCGAGAG CGGCAAGATC
GCGCCGAAGG CCGTCGAGGC GCTGCGCGAG AAGCGCACCA CGTATCACGA CCCGTGCTAC
CTCGGCCGCT ACAACGGCGA GACGGAATCG CCGCGCAAGC TGCTGAAGAC GATCGGCATC
CAGGTCGTCG AGATGGAGCG CAACGGCATG CGCGGGCGCT GCTGCGGCGG TGGCGGCGGT
GCGCCGCTGA CCGACATCCC CGGCAAGCAG CGTATTCCGG ACATCCGCAT CGCCGACGCG
CGCGCCATCG GCGCGGACGT GGTCGCGGTC GGGTGCCCGA ACTGCACCGC GATGCTCGAG
GGCGTCGTGG GCCCGCGCCC CGACGTGCTC GACGTGGCCG AACTCGTTGC CGCCTCGCTG
GAGTGA
 
Protein sequence
MNPSFLITAL LWLSVAGLAF AVAKRSSYWR LGRATAPGSF GVANLFAIPK RYFVDLHHVV 
ARDPYIAKTH VATAGGAIGA LALVFVNYGL AIYSPWLDKL IFLAALAMLV GVVFVWRRRA
AKNVPARLSR GPWNALPWLL GSFALGLVLF MVVPTGAMSG AFAVLCALLI GAGAFTMTIG
AAKGGPMKHA IAGLLHLAFH PRQERFAATR DSFTGNGTAT PPTALKLPDI EHEEYGVAKP
VEFRWNQLLS FDACVQCGKC EAACPAFAAG QPLNPKKLIQ DLVVGMAGGT DAAYAGSPTP
GLAVGQHRGE PNGPIVSGLI EEQTLWSCTT CRACVQECPM LIEHVDAIVD MRRNRTLVHG
TVPGKGQEVL ANLRETGTMG GYDAAARYDW SVDLSAPVAQ PGKPVDVLFV AGEGAFDMRY
QRTLRAFVKV LNKAGVDYAV LGGTETDTGD VARRLGDEAT FQRMAKRLIG TLGTLSYKQI
VTADPHVMHS LRNEYRALGL RVTVKHHTTY LAELAESGKI APKAVEALRE KRTTYHDPCY
LGRYNGETES PRKLLKTIGI QVVEMERNGM RGRCCGGGGG APLTDIPGKQ RIPDIRIADA
RAIGADVVAV GCPNCTAMLE GVVGPRPDVL DVAELVAASL E