| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4483 |
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| Symbol | |
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| ID | 4313375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1427295 |
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| End bp | 1428263 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152322 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_776367 |
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| Protein GI | 115359229 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGC AATCCCATGC AGCAATCCGC AGGCTCGGCA CGGCGCTCGC CGCGGCTGCA
TGCGTGCTGG CGACGCAGCC CGCGCACGCG GCCGATCCGC AGACGTGTCG CGACGTGAAG
ATGGCGGCGC CCGGCTGGAC GGACATCGAC GCGACGAACG CGATGGCCGG CGTCGTGCTG
AAGGCGCTCG GTTACCGGCA GGACGTCGCG AACCTGTCGG TGCCGATCAC GTACCAGGGC
TTGAAGAAAG GGCAGGTGGA CGTGTTCCTC GGCAACTGGA TGCCCGCGCA GGCACCGCTC
GTGAAGCCGT TCGTCGACGA GAAGTCGATC GACGTGCTGC ACGCGAACCT GAGCGGTGCG
AAGTTCACGC TGGCCGTGCC CGACTACGTC GCGGCCGCGG GCGTGCACAC GTTCGCCGAT
CTCGCGCGCT ATGCCGACCG CTTCGGCGAC AAGATCTACG GGATCGAGCC CGGCGCGCCC
GCGAACCAGA ACATCAAGCG GATGCTGTCC GACCATGCGC TCGGCCCGGC GAACTGGTCG
CTCGTCGAAT CGAGCGAGAC GGGCATGCTC ACGCAGGTCG AGCGTGCGGT GCGCGACAAG
CGCTGGATCG TCTTTCTGGC GTGGGAGCCG CATCTGATGA ATACCAAGTT CCACCTCACC
TACCTGTCGG GCGGCGACGC GTATTTCGGT CCGAACTACG GCGGCGCGAC GGTCAACACG
GTCACGCGCC CGGGCTTTGC CGGCCAGTGT GCGAACCTCG CGCGCCTGTT CCGGCAGATG
ACGTTCTCGG TCGACGTCGA AAACCGGATC ATCGCCGACA TGCTCGACCA CAAGACCTCG
CCCGCGCTCG CGGCGCAACA CGTGCTGAAG GCCGACCCGG CGCTCGTCGA GGGCTGGCTG
GACGGCGTGA CGACCGCGTC CGGCACACCG GCGCTGCCGG CCGTGCGCGC GGCGCTCGAC
GCCCGCTGA
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| Protein sequence | MKRQSHAAIR RLGTALAAAA CVLATQPAHA ADPQTCRDVK MAAPGWTDID ATNAMAGVVL
KALGYRQDVA NLSVPITYQG LKKGQVDVFL GNWMPAQAPL VKPFVDEKSI DVLHANLSGA
KFTLAVPDYV AAAGVHTFAD LARYADRFGD KIYGIEPGAP ANQNIKRMLS DHALGPANWS
LVESSETGML TQVERAVRDK RWIVFLAWEP HLMNTKFHLT YLSGGDAYFG PNYGGATVNT
VTRPGFAGQC ANLARLFRQM TFSVDVENRI IADMLDHKTS PALAAQHVLK ADPALVEGWL
DGVTTASGTP ALPAVRAALD AR
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