Gene Bamb_4472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4472 
Symbol 
ID4313364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1412775 
End bp1413932 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content66% 
IMG OID638152311 
Productamine dehydrogenase 
Protein accessionYP_776356 
Protein GI115359218 
COG category 
COG ID 
TIGRFAM ID[TIGR02658] methylamine dehydrogenase heavy chain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAA GGCGACGCAC CGCGGTTTGC GCGGCGACGC TGGCGTTCGC GGCGGCGTGG 
GCCGGCAGCG CGAGCGCGAC GGAAAAGCCC GAGGAACTCG TCGTGCAAAA GATGCCGTCG
TGGCATCCGC ATGAGGTGTA CGTCGTCGAC ATCGCGATGC CGACGATGAC CGACGGGCGC
ATCTACGTGT ATGACGCCGA CGCGAAGAAG CTGCTCGGCC AGATCGACGG CGGCTTCGCG
CCCGGCCTCG CGATCTCGCC CGACCACAAG ACGAGCTTCA TCGCGACGAC CTATTTCTCG
CGCGGCTCGC ACGGCACGCG CACCGACGTC GTCGAGATGA CCGACAACAC AACGCTCGAT
CACACTGGCG AGATCGTGAT TCCGGCGAAG CATGGGCAGC ACGTGCCGTC GCCGTACAAC
ACGGCGTTCA GCGCGGACGG CAAGCGGCTG TACGTCGCGA ACATCACGCC GGCCGCGTCG
GTGACGGTGA TCGACGCCGT GGCGAAGAAG GTGCTGTCGG AGATCGACAC CGCGGCATGC
GTGCTCGCGT ATCCGTCGGG GAACGACCGC TTCACCGCGC TGTGCGAAAG CGGCAAGGCG
CTGACCGTCA CGCTCGATGC GAACGGCAAG GAGGTGAAGC GCACGATGTC CGATGCGTTC
ATCGACGTCG ACAACGATCC GGCCTTCATC AACGCGTCGC GCTACAACGG TGGCTATCTG
TTCACGACGT ATCACGGCAA CGTGCGCAGC GCCGATTTCA GCGGCGACAA GCCGGCGTTC
GGCAAGCCGT GGTCGCTGCT GACCGACGCC GAGCGCGCCG AAGGCTGGCG CCCGGGCGGC
ATGCAGCAGA CGGCCGTGCA GGTGAAGCAG CACCGCTACT ACGTGCTGAT GCACAAGGGC
GGCGACGGCA CGCACAAGGA TCCGGGCACG CAGGTGTGGG TCTACGACCT GAAGACGAAA
CAGCGGGTCG CGCGCTGGGA TCTCGCGCAG CAGAAGGTCG ATCCGCTCGT GTCGATCCAG
GTCAGCGAGG ACGACAAGCC GTTGTTCTAC GGGCTGACGG GCACGTCCGA CCTCGTCGTG
ATGGACGCGC GCACCGGCAA GCGGCAGCAC GTCGAGAAGC AGATCGGCAG TACGTCGACG
CTGCTCGTGA ACCCGTGA
 
Protein sequence
MRARRRTAVC AATLAFAAAW AGSASATEKP EELVVQKMPS WHPHEVYVVD IAMPTMTDGR 
IYVYDADAKK LLGQIDGGFA PGLAISPDHK TSFIATTYFS RGSHGTRTDV VEMTDNTTLD
HTGEIVIPAK HGQHVPSPYN TAFSADGKRL YVANITPAAS VTVIDAVAKK VLSEIDTAAC
VLAYPSGNDR FTALCESGKA LTVTLDANGK EVKRTMSDAF IDVDNDPAFI NASRYNGGYL
FTTYHGNVRS ADFSGDKPAF GKPWSLLTDA ERAEGWRPGG MQQTAVQVKQ HRYYVLMHKG
GDGTHKDPGT QVWVYDLKTK QRVARWDLAQ QKVDPLVSIQ VSEDDKPLFY GLTGTSDLVV
MDARTGKRQH VEKQIGSTST LLVNP