| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4457 |
|---|
| Symbol | |
|---|
| ID | 4313349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1395808 |
|---|
| End bp | 1396296 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638152296 |
|---|
| Product | thioesterase-like protein |
|---|
| Protein accession | YP_776341 |
|---|
| Protein GI | 115359203 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0730992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCG ATACCCCGCT GACGATATAC CGCGACGTCG TGCGGCCCGA GTGGGTCGAC
TACAACGGCC ATCTGCGCGA CGCGTTCTAT TTGCTGATCT TCAGTTTCGC GACCGATGCG
CTGCTGGAGC GCATCGGCCT CGACGATGCC GCGCGTCGCG AGCGGGGCCG CTCGGTCTAT
ACGCTCGAAG CGCACGTGAA CTATCTGCAG GAGATCAAGG AAGGCACGCG CGTGCGCGTC
GATGCGCGGG TGTTCGCGCA CGACGCGAAG CGGCTGCACC TGTATCTCGA ACTGTTTGCC
GACGGGCGCG ACGGCGCGGT GTCGGCGAGC GAGCAGATGC TGCTGCACGT CGACACGCGC
GGCGGCGCGA AATCGGCGCC GTTCGACGAC GACGTCGCCG CGCGCGTGGC CGAACTGCAT
GCGTTGCAGC GCGATTGCGC GGCGCCCGCG TATGCGGGCC GCGTGATCGG CCTGCCGCCG
CGCCGCTAG
|
|---|
| Protein sequence | MTGDTPLTIY RDVVRPEWVD YNGHLRDAFY LLIFSFATDA LLERIGLDDA ARRERGRSVY
TLEAHVNYLQ EIKEGTRVRV DARVFAHDAK RLHLYLELFA DGRDGAVSAS EQMLLHVDTR
GGAKSAPFDD DVAARVAELH ALQRDCAAPA YAGRVIGLPP RR
|
|---|
| |