| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4447 |
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| Symbol | |
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| ID | 4313340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1385437 |
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| End bp | 1386978 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152287 |
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| Product | ABC transporter related |
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| Protein accession | YP_776332 |
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| Protein GI | 115359194 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00416844 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACCTG ATCCGAACCC GGCCGCCGCA CCCGCCGCGC TGATCGAGCT GACCGGCGTC
AGCAAGCGCT TTCCGGGCGT GCAGGCGCTC GACGATTGCC GGTTCGACCT GCGCGCCGGC
GAAGTGCACG CGCTGATGGG CGAGAACGGC GCCGGCAAGT CGACGCTGAT GAAGATCCTC
GCCGGCGTGT ATCAAAAGGA CGGCGGTGAA ATCCGGATGG ACGGCCGCGC GGTGGAGATC
GACGATCCGC GCGCCGCGCA GGCGCTGGGG ATCGGCATCA TCCATCAGGA ACTGAACCTG
ATGAACCACC TGAGCGTCGC GCAGAACATC TTCATCGGGC GCGAGCCGCG CGGCCGCTTC
GGCGTGTTCG TCGACGAGGA CAAACTCAAC CGCGACGCGG CCGCGATCTT CGCGCGGATG
CGGCTCGATC TCGACCCGCG AACGCTCGTC GGCCGGCTGA CGGTCGCGAA GCAGCAGATG
GTCGAGATCG CGAAGGCGCT GTCGTTCGAC TCGCGCGTGC TCATCATGGA CGAGCCGACC
GCCGCGCTGA ACAACGCGGA GATCGCCGAG CTGTTCCGCA TCATCGGCGA GTTGCGCGCG
CACGGTGTCG GCATCGTCTA TATCTCGCAC AAGATGGACG AACTGCGCCA GATCGCCGAC
CGCGTGACGG TGATGCGCGA CGGCAAGTAT GTCGCGACCG TGCCGATGGC CGGTACGTCG
ATGGACGCGA TCATCGCGAT GATGGTCGGC CGCCAGCTCG ATACTGAATT CCGCACGCCG
CCCGATACGT CCGCCAACGA CGTCGCGCTC GAAGTGCGCG GGCTGTCGCG CGGGCGCGCG
ATCCGCGACG TCGGCTTCAC GCTGCGGCGC GGCGAGATTC TCGGCTTCGC GGGGCTGATG
GGCGCGGGCC GCACCGAGGT CGCGCGGGCG GTGTTCGGCG CGGACCCGGT CGACGCCGGC
GAGATCCGCG TGCACGGCAA GACCGTGACG ATCCGCACGC CGGCCGACGC GGTCGCGCAC
GGGATCGGTT ATCTGTCGGA AGACCGCAAG CACTTCGGGC TCGCGGTCGG GATGGACGTG
CAGAACAACA TCGCGCTGTC GAGCATGCGC CGCTTTGTGC GGCGCGGCCT GTTCCTCGAT
GCGCGCCAGA TGCGCGACAC CGCGCAGTCG TACGTGCGGC AGCTCGCGAT CCGCACGCCG
TCGGTCGCGC AGCCCGCGCG CCTGCTGTCG GGCGGCAACC AGCAGAAGAT CGTGATCGCG
AAATGGCTGC TGCGCGATTG CGACATCCTG TTCTTCGACG AGCCGACGCG CGGCATCGAC
GTCGGCGCGA AAAGCGAGAT CTACAAGCTG CTCGACGCGC TCGCCGCCGA GGGCAAGGCG
ATCGTGATGA TCTCGTCGGA GTTGCCCGAG GTGCTGCGCA TGAGCCACCG GATTCTCGTG
ATGTGCGAAG GGCGCGTGAC CGGCGAGTTG CGCGCGGCCG ACGCCACGCA GGAAAAGATC
ATGCAGCTCG CGACGCAGCG CGAGTCGACC GTATTGTCCT GA
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| Protein sequence | MQPDPNPAAA PAALIELTGV SKRFPGVQAL DDCRFDLRAG EVHALMGENG AGKSTLMKIL
AGVYQKDGGE IRMDGRAVEI DDPRAAQALG IGIIHQELNL MNHLSVAQNI FIGREPRGRF
GVFVDEDKLN RDAAAIFARM RLDLDPRTLV GRLTVAKQQM VEIAKALSFD SRVLIMDEPT
AALNNAEIAE LFRIIGELRA HGVGIVYISH KMDELRQIAD RVTVMRDGKY VATVPMAGTS
MDAIIAMMVG RQLDTEFRTP PDTSANDVAL EVRGLSRGRA IRDVGFTLRR GEILGFAGLM
GAGRTEVARA VFGADPVDAG EIRVHGKTVT IRTPADAVAH GIGYLSEDRK HFGLAVGMDV
QNNIALSSMR RFVRRGLFLD ARQMRDTAQS YVRQLAIRTP SVAQPARLLS GGNQQKIVIA
KWLLRDCDIL FFDEPTRGID VGAKSEIYKL LDALAAEGKA IVMISSELPE VLRMSHRILV
MCEGRVTGEL RAADATQEKI MQLATQREST VLS
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