Gene Bamb_4443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4443 
Symbol 
ID4313336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1381597 
End bp1382358 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID638152283 
ProductGntR domain-containing protein 
Protein accessionYP_776328 
Protein GI115359190 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.552946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00102346 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCATCC AGCCGATTCA GAACCGCCGC CTCTACCAGC AGATCGCCGA CAAGCTCAGC 
GCGATGATCG GCTCTGGCGA TTTTCCGCCG GGCAGCTATC TGCCGCCCGA GCGCGAACTG
GCCGAGCAGT TCGGCGTGTC GCGCACGTCG GTGCGCGAGG CGCTGATCGC GCTTGAAGTG
AGCGGGCTCG TCAGCGTGCG TGTCGGCGAC GGCGTGAAGG TGCGCCAACC CGAGGCGGCT
GCCGCACCGG CACCGCGGCC CGACACGAAG GTTGCGCCGT TTTCGATCGT CGAGATCGAT
CCCGAGCTCG GCATCGCGCT CGACCTCGAT ACCGAAATCC CGCCGTTCGC GCTGTTGCAG
GCGCGCCGGC TGATCGAGCC GGAAGCCGCA TCGCTCGCGG CGAAACACGG CTCGGACGAG
CAGATCGAAG GGATTCACGA CGCGTTCCTG CGCAACCAGG AAGACAACCG CAGCGGCTCG
CTCACGCATC CGGGCGACCG GCTGTTCCAT ATCCGTATCG CGGAAGCGAG CGACAACCCG
GCTTATGCGC TGATGATCAA GCAGTTGCTC GCGCACAAGT ACGACCTGAT GTTCCAGCGC
CTGCAGTCGC TGTACATGCC GAACGACATG CCGCACCGGT CGGAGCTGGA ACACCGCGCG
ATCCTCGACG CGATCCGCGC ACGCGACCCC GAGGCCGCGC GCCGCGCGAT GGCCGAGCAT
CTCGACGAGG TGATCCGGAT CTTCGGCCGC GCGCTCGACT GA
 
Protein sequence
MSIQPIQNRR LYQQIADKLS AMIGSGDFPP GSYLPPEREL AEQFGVSRTS VREALIALEV 
SGLVSVRVGD GVKVRQPEAA AAPAPRPDTK VAPFSIVEID PELGIALDLD TEIPPFALLQ
ARRLIEPEAA SLAAKHGSDE QIEGIHDAFL RNQEDNRSGS LTHPGDRLFH IRIAEASDNP
AYALMIKQLL AHKYDLMFQR LQSLYMPNDM PHRSELEHRA ILDAIRARDP EAARRAMAEH
LDEVIRIFGR ALD