Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4443 |
Symbol | |
ID | 4313336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1381597 |
End bp | 1382358 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638152283 |
Product | GntR domain-containing protein |
Protein accession | YP_776328 |
Protein GI | 115359190 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.552946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00102346 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCATCC AGCCGATTCA GAACCGCCGC CTCTACCAGC AGATCGCCGA CAAGCTCAGC GCGATGATCG GCTCTGGCGA TTTTCCGCCG GGCAGCTATC TGCCGCCCGA GCGCGAACTG GCCGAGCAGT TCGGCGTGTC GCGCACGTCG GTGCGCGAGG CGCTGATCGC GCTTGAAGTG AGCGGGCTCG TCAGCGTGCG TGTCGGCGAC GGCGTGAAGG TGCGCCAACC CGAGGCGGCT GCCGCACCGG CACCGCGGCC CGACACGAAG GTTGCGCCGT TTTCGATCGT CGAGATCGAT CCCGAGCTCG GCATCGCGCT CGACCTCGAT ACCGAAATCC CGCCGTTCGC GCTGTTGCAG GCGCGCCGGC TGATCGAGCC GGAAGCCGCA TCGCTCGCGG CGAAACACGG CTCGGACGAG CAGATCGAAG GGATTCACGA CGCGTTCCTG CGCAACCAGG AAGACAACCG CAGCGGCTCG CTCACGCATC CGGGCGACCG GCTGTTCCAT ATCCGTATCG CGGAAGCGAG CGACAACCCG GCTTATGCGC TGATGATCAA GCAGTTGCTC GCGCACAAGT ACGACCTGAT GTTCCAGCGC CTGCAGTCGC TGTACATGCC GAACGACATG CCGCACCGGT CGGAGCTGGA ACACCGCGCG ATCCTCGACG CGATCCGCGC ACGCGACCCC GAGGCCGCGC GCCGCGCGAT GGCCGAGCAT CTCGACGAGG TGATCCGGAT CTTCGGCCGC GCGCTCGACT GA
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Protein sequence | MSIQPIQNRR LYQQIADKLS AMIGSGDFPP GSYLPPEREL AEQFGVSRTS VREALIALEV SGLVSVRVGD GVKVRQPEAA AAPAPRPDTK VAPFSIVEID PELGIALDLD TEIPPFALLQ ARRLIEPEAA SLAAKHGSDE QIEGIHDAFL RNQEDNRSGS LTHPGDRLFH IRIAEASDNP AYALMIKQLL AHKYDLMFQR LQSLYMPNDM PHRSELEHRA ILDAIRARDP EAARRAMAEH LDEVIRIFGR ALD
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