| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4439 |
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| Symbol | |
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| ID | 4313332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1376006 |
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| End bp | 1377442 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152279 |
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| Product | N-acyl-D-amino-acid deacylase |
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| Protein accession | YP_776324 |
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| Protein GI | 115359186 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.602072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00102346 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATTTCG ACGTGATCCT GCGCCGCGGC GAACTGATCG ACGGTACGGG AGCCGCGCGC
TTCGAGGCCG ATCTCGGCGT GACCGGCGAG CGCATCGCCG CGATCGGCGA CCTGAGCGGC
GCAACCGCCG TGCACACGCT CGATGCGAAC GGCCTGGTCG TCGCGCCGGG CTTCATCGAC
AGCCACACGC ACGACGATGC GTTCGTGCTG ACCGCCCCCG ACGTCGAGCC GAAAGTTGCG
CAAGGCGTGA CCACGGTGAT CGCCGGTAAT TGCGGGATCA GTCTCGCGCC GCTGCTCGCG
GAACGCGACG TGCCGCAACC GCTCGACCTG CTGGGCGCAT GGCAGTCGTT TCGCTTTCCG
TCCTTTCGCG CCTATCTCGA CGCGCTCGAC GCAACGCCCG CCGCCATCAA CACGGCGGCC
CTGGTCGGCC ACTCGACGCT GCGCGTGCGG CACATGGCCG ATCTCGGACG CGCAGCCGAC
GCGGCGGAGA TCGCGGCGAT GGCGGCCGAC GTGCGCGAGG CGATGACGGC CGGCGCATTC
GGCGTCTCGA CGGGCACCTT TTACCCGCCC GCGGCGGCCG CGACGACCGA CGAGCTGATC
GACGTGTGCG CGCCGCTGCG CGAGACGGGC GGCGTGTTCG CGACGCATCT GCGCGACGAA
ACCGATGCGA TCATTGCGTC GCTCGACGAA GCTTTCTCGA TCGGTCGCGC GCTCGACGTG
CGCATCGTGC TGTCGCATCA CAAGGTGGCC GGCAAGGCGA ACCACGGCCG CTCGGTTGAG
ACGCTCGCGC ATATCGATGC GCAGCGCATC CGGCAACCGC TGTGCCTCGA CTGCCATCCG
TATCCCGCCA CGTCGACGAT GCTGCGCGCG GATCGCATCC GCCAGTCGTC CCGCGTGCTC
CTCGCATGGT CGAAGCCGCA TCCCGAACTC GCGGGCCGCG AATTCGCCGA ACTGCTGCCA
CTGTTCGGCG ATTCCATCGA CGCCGCGATC GATGCGCTGC GCCCCGCCGG CGCGATCTAC
TTCGTGATGG ACGAAGCGGA CGTCGAGCGC ATCATGCGCC ACGAACTGAC GATGGTCGGC
TCCGACGGCC TGCCCAACGA CATGCGCCCG CATCCGCGGC TGTGGGGTAC GTTTCCGCGC
GTGCTCGGCG AATTCTCCCG CGAGCGCGGC CTGTTCCCGC TCGAAACCGC CGTGCGCAAG
ATGACAGCCC TCACTGCCGA ACAATTCGGA ATCGCGAAGC GCGGGCGCCT CTCGGTCGGT
CACTACGCCG ATTTGGTCGT GTTCGATCCG GCGCGCGTGA TCGACCGTGC GACGTTCGCT
CACCCGACGC TACGCCCTGA AGGCATCGAG CACGTGTTCG TCAACGGCCG AGCCGTGCTC
GAACACGGCC GGCACACCGG CACGCGCCCC GGCCGGGCGC TACGCCGCGC AAGCTAG
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| Protein sequence | MHFDVILRRG ELIDGTGAAR FEADLGVTGE RIAAIGDLSG ATAVHTLDAN GLVVAPGFID
SHTHDDAFVL TAPDVEPKVA QGVTTVIAGN CGISLAPLLA ERDVPQPLDL LGAWQSFRFP
SFRAYLDALD ATPAAINTAA LVGHSTLRVR HMADLGRAAD AAEIAAMAAD VREAMTAGAF
GVSTGTFYPP AAAATTDELI DVCAPLRETG GVFATHLRDE TDAIIASLDE AFSIGRALDV
RIVLSHHKVA GKANHGRSVE TLAHIDAQRI RQPLCLDCHP YPATSTMLRA DRIRQSSRVL
LAWSKPHPEL AGREFAELLP LFGDSIDAAI DALRPAGAIY FVMDEADVER IMRHELTMVG
SDGLPNDMRP HPRLWGTFPR VLGEFSRERG LFPLETAVRK MTALTAEQFG IAKRGRLSVG
HYADLVVFDP ARVIDRATFA HPTLRPEGIE HVFVNGRAVL EHGRHTGTRP GRALRRAS
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