| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4436 |
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| Symbol | |
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| ID | 4313329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1372537 |
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| End bp | 1373805 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152276 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_776321 |
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| Protein GI | 115359183 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.397497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000180692 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACGCT CCGCGCCCCC CATTTCGTCT TCACGTGTGC CGCGCCCGAC GCTGCAAAGC
GTGCTGCGTC GCGCGCATTT GCGCCTCGCG TTCGTCGCGG TTGCGATGGC CGCCGTGTCG
CTGATCGTCG TCGCCGTGAT CGCGTTGCGC GCGTATGCCG GCAACAACCT GAACCTGCTG
GCCCGCTCGC TCGGCTATAC GGTCGAGGCG GCGCTCGTGT TCGGCGACCG CGTCGCGGCA
AACGAGGCGA TCGCCACCAT CGCTAACGAC GAGGACGTCG CGCAGGTGGT CGTCACCAAT
GCCAGGGGGC AATTGTTCGC CACCTGGAAG CTGCCCGCCG AAGGCCGGAT TGCACGGCTC
GAGCGCGGTG TCGCCGATCT CGCGCTGCCC GGGCCCGTGA CCATCCCGGT GATGCACGAC
GGCATCGTCG TCGGTCAGGT CATCGTGCGT GGGCGCGGAC ACCAATTCTT CGGATTCCTG
CTCGGTGGCA TTGGCGGCAT TCTCGGCTGC CTGCTCGTCA GCGTGCTCGG CGCGTATGTC
AGCTCGAAGC GTCTGCTGCG CAACATCGTT GCGCCGCTGC GCGCGCTCGC CGGCGTCGCG
CATGCGGTGC GGCGCGAGCG TGCGTTCGGG CGGCGCGTCG AGCCCGCGAC GATCGCCGAA
CTCAACCAGC TCGGCGACGA CTTCAACGCG CTGCTCGACG AATTGGAAGA CTGGCAGAAC
ACGCTGCGCG ACGAAAACGC ATCGCTCGAA CACAAGGCGA CGCACGATGC GCTCACCGGG
CTGCCCAACC GTGCGCAGTT CGAGTCGCGT CTGTCGGTGG CGCTTTGCGA TGCCGTGGTG
ACCGGGCAGC GGGTCGCCAT CCTGTATCTC GACTGCGACC GCTTCAAGGA GATCAACGAC
TGCCTGGGCC ACGATGCCGG CGACGCGGTG CTGGTCGGCG TCGCGGCGCG GCTGCGCACG
CAGGTGCGCG AGACCGATCT GGTCGCGCGC CTGGGCGGCG ACGAATTTGC AGTGATGCTG
GGCACTGTGC GCGAAGTGGA AAGCGTGTGC CGAATCGCCG ACGAGATTTT GTCCGGCATG
GTGCCGTCGA TCGAACTGCC CGACGGACGC ATGGTGGCCA CCATGATGAG TGCCGGCGTG
GCGCTGTATC CCGATCACGC GTCGGACGCG AACGGCTTGC TGCGGGCGGC GGATGCCGCG
ATGTACCGCG CCAAGCGCAC GCGGCCGGGG ACGTGGCAGT GGGCGGAAGG CGTTGCCGGG
CGGGTTTGA
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| Protein sequence | MTRSAPPISS SRVPRPTLQS VLRRAHLRLA FVAVAMAAVS LIVVAVIALR AYAGNNLNLL
ARSLGYTVEA ALVFGDRVAA NEAIATIAND EDVAQVVVTN ARGQLFATWK LPAEGRIARL
ERGVADLALP GPVTIPVMHD GIVVGQVIVR GRGHQFFGFL LGGIGGILGC LLVSVLGAYV
SSKRLLRNIV APLRALAGVA HAVRRERAFG RRVEPATIAE LNQLGDDFNA LLDELEDWQN
TLRDENASLE HKATHDALTG LPNRAQFESR LSVALCDAVV TGQRVAILYL DCDRFKEIND
CLGHDAGDAV LVGVAARLRT QVRETDLVAR LGGDEFAVML GTVREVESVC RIADEILSGM
VPSIELPDGR MVATMMSAGV ALYPDHASDA NGLLRAADAA MYRAKRTRPG TWQWAEGVAG
RV
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