Gene Bamb_4435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4435 
Symbol 
ID4313328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1371940 
End bp1372452 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID638152275 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_776320 
Protein GI115359182 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0232251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000146268 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGCT CGTTGCCGGT GAGCATTGGG AGGCGGTGCG TCGGAAGCGC GGTGCTGCTG 
TGTCTGTTGC TGGGCGGGTG CAAGACGCCG CCGCCGCTGC ATCGGGGGCT CACGCAGACG
CAGGTCACGG CGCTGAAGTC GGCCGGGTTT CAGGAGACGG GGCAAGGGTT CGAGTTCGGC
TCGAGCGGGC CGATTTTGTT CGATTTCGAC CGGTATAACC TGAAGCCGGA TGTGAGGCGG
ATCGTCGAGC GGATCGGGAG GACGTTGAGG TCGGCCGGCA TCAATGGGGT GCGGGTTTAT
GGGTACTCCG ATGATGAGGG GACGGTGGCT TACGATCGGG AGCTGTCGCG GCGGCGGGCG
GAGGTGGTGG CGATCGAACT GGTGGATGTG GGGCTGGACG GGAAGCGGGT TGCGGTCATA
GGGAAGGGGA AGAGCGATCC GGTGGGGGAC AACCGGACGC CAACCGGGCG GGCGCAGAAT
CGGCGGGCGG CGATTGTGGT TTCGCCGCGG TGA
 
Protein sequence
MKSSLPVSIG RRCVGSAVLL CLLLGGCKTP PPLHRGLTQT QVTALKSAGF QETGQGFEFG 
SSGPILFDFD RYNLKPDVRR IVERIGRTLR SAGINGVRVY GYSDDEGTVA YDRELSRRRA
EVVAIELVDV GLDGKRVAVI GKGKSDPVGD NRTPTGRAQN RRAAIVVSPR