| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4434 |
|---|
| Symbol | |
|---|
| ID | 4313327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1370047 |
|---|
| End bp | 1371603 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638152274 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_776319 |
|---|
| Protein GI | 115359181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000330507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000165626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | TTGACGAGTC CAGACGAAAA AAAACTTATC GCGCTTCGGC AAAAAATTAC CGAAAGCCTT
CGTATTCAGC GCGATAGTTC CGAAGCCGTT CCATATATCG ATGCCAGCAA CATCGTAGGT
GACGTCTGTG CAAGGCAAAA TCACGCCATT TTTGCGCGGC GCGGTTGCGG AAAAACTCTC
CTTCTTCATC ATTCGAGCCG ATCCGTTGAT GACTCCGTCC GCGCGGTCTA TTTGAATTGC
GAAGATTTCA AAAGACATTC ATTTCCAAAT GTCCTAATTG AAATTCTCGA CGCACTGTTC
GGCGAGCTCG AAAGACATCT CACTGGATGG TTTGGTAGAA AAAAGCGATC ACGGGACCTA
GTAAAGCAAA TTCGCGGAGA ACTCTCCAAG CTAAGAGTTT CCGAAGACTC CAGCGAAGAA
TCTGTTCGGA GCACAAGTAG CGCGGAGCAA CACACGTCTG ATGAATTGTC ACTTGGGATT
TCGAGCACAC CAATTACTGC AAAAATCGGT GAAATCTCCG CTCATAAGTC AAAAACGGAG
ATCGAGAGAA ACTATAAAGT CCGCAACGAT AAGCTGCGTG AACTAGATAT GTTGCTTCCA
CGCCTTAAAG AACAAGTTCG AGAGTTCTTC CACGTCTCCA GCTCAGTAAA ATCTGTATTT
CTCCAAATCG ATGACCTTTA TCATCTTAAG AAAATTGACC AGCCGTTCGT GATGGATTAC
ATCCATCGTC TTTGCAAGGA CGTACCGCTC TATTTCAAGG TTGCTACTCT GCGCCATGCA
TCTTCCCTAT ACGTTGATCG CGACGGCCAA CCCATCGGCG CCCAAGAACG CCATGATTAT
CAACCTATCA ATATCGACTA CACATTCACG GACTTTGCGC GAACTCGCGA TCAGAACCGC
AGAATTTTTC ATGAATTTGG AAGATCGGTA GGGCTAAAAT CCAATCAAAT CGACCAGCTT
TTCAAAGGGG AAGGGTTTGA TCGGCTCGTG ATGGCCGGCG GTGGTGTTCC GAGAGATACT
TTGTCATTGT TTCTGGAGGT TTTAAATACT GTTCGTGAAA ATGGTGGCGA CCGAATCGGC
AAAGATGATG TCAGAGTCAT GAGCCGGTCC AATTTTGAAC GCCGCATCGA GGAATTAAAG
CAGGACTCCG AAGGTGGCGA ACAAGACGTG CTAATGCGCG GCATCTACGC ACTCAGAACG
TTCTGTCTAA CAAAGAAATC TAATGCCTTC GTAATTTCCG AACAATCTTT ACAACAAAGA
GACGATTTTC GACAACTCAT AAATCGCCTA CTTGATTATC GAATAATCCA CAATGCTGGC
GCCGCAATAA CTCATAAATC TCAGGCCGGA ACATACCAAG CGTTCGCCAT TGATATAGGC
TGCTACGCCC ATCTTCGTAA GCTTGATGGC CGATTCAATG AGCTTGACCT TTCCGATCGA
GACGCAAAGG AAAAATTGCG CTCGGCACCG GTTTTCGGTC CATCTGATTT TGAATCGCTC
CTTCAGGCAA CCCCTCAAAA CGTTGAGGCA GCGTTGCTAG GAGATGTCGA TAGCTGA
|
|---|
| Protein sequence | MTSPDEKKLI ALRQKITESL RIQRDSSEAV PYIDASNIVG DVCARQNHAI FARRGCGKTL
LLHHSSRSVD DSVRAVYLNC EDFKRHSFPN VLIEILDALF GELERHLTGW FGRKKRSRDL
VKQIRGELSK LRVSEDSSEE SVRSTSSAEQ HTSDELSLGI SSTPITAKIG EISAHKSKTE
IERNYKVRND KLRELDMLLP RLKEQVREFF HVSSSVKSVF LQIDDLYHLK KIDQPFVMDY
IHRLCKDVPL YFKVATLRHA SSLYVDRDGQ PIGAQERHDY QPINIDYTFT DFARTRDQNR
RIFHEFGRSV GLKSNQIDQL FKGEGFDRLV MAGGGVPRDT LSLFLEVLNT VRENGGDRIG
KDDVRVMSRS NFERRIEELK QDSEGGEQDV LMRGIYALRT FCLTKKSNAF VISEQSLQQR
DDFRQLINRL LDYRIIHNAG AAITHKSQAG TYQAFAIDIG CYAHLRKLDG RFNELDLSDR
DAKEKLRSAP VFGPSDFESL LQATPQNVEA ALLGDVDS
|
|---|
| |