| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4430 |
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| Symbol | livM |
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| ID | 4313323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1364560 |
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| End bp | 1365831 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152270 |
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| Product | leucine/isoleucine/valine transporter permease subunit |
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| Protein accession | YP_776315 |
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| Protein GI | 115359177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.460917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00013336 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCAAG TCATTTCCGT TCGCCGTCCG GCCGCCGACG CGTCGGTCAG CCAGGCGCTG
AAGAATGCCG TGGCCGCCGC GTTCCTGACG GCGATCCTCA CGATTCCGGT GCTCGGGCTG
CAGTTGAAGC TCGACGGCTA TCAGGTCGTG CTGACGCCGC ACTGGCGTCC GGTGTGGATC
GCGGTCGCGG CCGTGTTCCT GTTCCAGCTG TTCAAGCCGT GGCTCGTGCG CGCGAAATCG
GCGGTGAAGC TGCCGGCGCT GCCCGCAATG GGCGCGCAGC AGCAGCGCGT GGTCATCTGG
GTGCTGCTCG CGGTCGGGCT CGTGTGGCCG TTCTTCGGCT CGCGCGGCGC GGTGGACGTC
GCGACGCTCG CGCTGATCTA CGTGATCCTC GGTCTCGGGC TGAACATCGT GGTCGGTTTC
GCGGGTCTGC TGGACCTCGG CTATGTCGGG TTCTACGCGG TCGGCGGCTA TACGTACGCG
ATGCTGAACC AGTATTTCGG GCTGTCGTTC TGGGAGTGTC TGCCGATCGC GGCAGTCGCC
GCGGCGACGT TCGGCTTCCT GCTCGGCTTC CCGGTGCTGC GCCTGCGCGG CGACTATCTC
GCGATCGTCA CGCTCGGCTT CGGCGAAATC ATCCGCCTGC TCGCGAACAA CCTGACGAGC
CTCACGGGCG GCCCGGACGG CATCTCGAGC ATTCCGAAGC CGACGGTGTT CGGCTTCGAG
ATGGCGCGCT CGGCGAGCGT CGAAGGCGCG AAGACTTTCC ACGAGCTGAT CGGGCTGGAA
TACAGCGGCG AGCACATGGT GATCTTCCTG TACCTGATCG CGCTGGTGCT GGTCGGCTTC
ACGCTGTTCG TGACGAGCCG CCTGATCCGC ATGCCGATGG GCCGCGCATG GGAAGCGCTG
CGCGACGACG AGATCGCGTG CCGTTCGCTG GGTCTGAACC CGACGCGCAT CAAGCTGTCG
GCGTTCACGC TCGGCGCGGC GTTCGCGGGC ATCGGCGGCG CGTTCTTCGC CGCGCGTCAG
GGCCTCGTGA ATCCTGAATC GTTCACCTTC ATCGAATCGG CGCTGATCCT CGCGATCGTG
GTGCTCGGCG GGATGGGCTC GCAGCTCGGC GTGATTCTCG CGGCGATCCT GCTGACCGTG
CTGCCGGAAG TCGCGCGCGG CTTCGCAGAG TACCGGATGC TGATCTTCGG TCTGGTGATG
GTGTTGATGA TGATGTGGCG TCCGCAGGGC CTGCTGCCCG CGAGCCGTCC CCACGTGGAG
CTGCCGCAAT GA
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| Protein sequence | MSQVISVRRP AADASVSQAL KNAVAAAFLT AILTIPVLGL QLKLDGYQVV LTPHWRPVWI
AVAAVFLFQL FKPWLVRAKS AVKLPALPAM GAQQQRVVIW VLLAVGLVWP FFGSRGAVDV
ATLALIYVIL GLGLNIVVGF AGLLDLGYVG FYAVGGYTYA MLNQYFGLSF WECLPIAAVA
AATFGFLLGF PVLRLRGDYL AIVTLGFGEI IRLLANNLTS LTGGPDGISS IPKPTVFGFE
MARSASVEGA KTFHELIGLE YSGEHMVIFL YLIALVLVGF TLFVTSRLIR MPMGRAWEAL
RDDEIACRSL GLNPTRIKLS AFTLGAAFAG IGGAFFAARQ GLVNPESFTF IESALILAIV
VLGGMGSQLG VILAAILLTV LPEVARGFAE YRMLIFGLVM VLMMMWRPQG LLPASRPHVE
LPQ
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