| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4396 |
|---|
| Symbol | |
|---|
| ID | 4313290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1335638 |
|---|
| End bp | 1336939 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638152236 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_776282 |
|---|
| Protein GI | 115359144 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.323664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0500816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCA TCAAGCGGTA TTTCGGCTTC GCTGAAGCCG GCACCGACTT CCGCACCGAA
ATACTCGCGG GCGTCACCAC GTTCCTGACG ATGGCTTACA TCATCTTCGT CAACCCGGCG
ATCCTCGGCG ACGCCGGCAT GCCGAAGGAA TCCGTGTTCG TCGCGACCTG CCTCGTCGCG
GCGCTGGCGT CGCTCATCAT GGGGCTGTAC GCGAACTACC CGATCGCCTG CGCGCCGGGC
ATGGGCCTGA ACGCGTATTT CGCGTACACG GTCGTCAAGG GGATGGGTTT CACGTGGCAG
GCCGCGCTCG GCGCGGTGTT CATCTCCGGC TGCCTGTTCC TGCTCGTCAC GCTGTTCCGC
GTGCGCGAAG CGATCGTCAA CGGCATTCCG AAATCGCTGC GCATCTCGAT CACCGCCGGC
ATCGGGCTGT TCCTCGGCAT CATCTCGCTG AAGACCTCCG GCGTGATCGT CGGCAGCCCG
GCCACGCTCG TCACGCTCGG CGACCTGCAC AAGCACGACA CGATCCTCGC GATCATCGGC
TTCTTCACGA TCGTCACGCT CGACCATCTG CGCGTGCGCG GCGCGATCCT GATCGGCATC
ATCGGCGTGA CGATCCTGTC GTTCTTCTTC GGCGGCAACC AGTTCCACGG CGTGTTCTCC
GCGCCGCCGT CGATCGACGC GACGCTGTTC AAGCTCGACA TCGGCGCCGC CCTGTCGACC
GGCATCATCA ACGTGATCCT TGTGTTCTTC CTCGTCGAGC TGTTCGACGC GACCGGCACG
CTGATGGGCG TCGCGAACCG CGCGGGCCTG CTCGTCGAAG GCAAGATGAA CCGCCTGAAC
AAGGCGCTGC TCGCCGACAG CACCGCGATC GTCGCGGGCT CGGTGCTCGG CACGTCGTCG
ACCACCGCGT ATATCGAAAG CGCGTCGGGC GTGCAGGCCG GCGGCCGCAC GGGTGTGACG
GCGATCACCG TCGCGGTGCT GTTCCTCGCG TGCCTGTTCA TCGCGCCGCT CGCCGGCGTC
GTGCCGGCCT ACGCGACCGC GCCCGCGCTG CTGTACGTGT CGTGCCTGAT GCTGCGCGAG
ATGGTCGACG TGCCGTGGGA CGATGCGACC GAAGCCGTGC CGGCCGCGCT GACCGCGCTG
CTGATGCCGT TCACGTACTC GATCGCGAAC GGCGTCGCGT TCGGCTTCAT CTCGTATGGC
GGCCTGAAGC TGCTGACGGG CCAGGCCCGC ACGGTCAAGC CGGTCGTGTG GATCATCGCG
GCCGTGTTCC TGTTCCGCTT CTTCTATCTC GGCAGCGAGT GA
|
|---|
| Protein sequence | MESIKRYFGF AEAGTDFRTE ILAGVTTFLT MAYIIFVNPA ILGDAGMPKE SVFVATCLVA
ALASLIMGLY ANYPIACAPG MGLNAYFAYT VVKGMGFTWQ AALGAVFISG CLFLLVTLFR
VREAIVNGIP KSLRISITAG IGLFLGIISL KTSGVIVGSP ATLVTLGDLH KHDTILAIIG
FFTIVTLDHL RVRGAILIGI IGVTILSFFF GGNQFHGVFS APPSIDATLF KLDIGAALST
GIINVILVFF LVELFDATGT LMGVANRAGL LVEGKMNRLN KALLADSTAI VAGSVLGTSS
TTAYIESASG VQAGGRTGVT AITVAVLFLA CLFIAPLAGV VPAYATAPAL LYVSCLMLRE
MVDVPWDDAT EAVPAALTAL LMPFTYSIAN GVAFGFISYG GLKLLTGQAR TVKPVVWIIA
AVFLFRFFYL GSE
|
|---|
| |