Gene Bamb_4392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4392 
Symbol 
ID4313286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1332490 
End bp1333395 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content65% 
IMG OID638152232 
Productmetal-dependent hydrolase 
Protein accessionYP_776278 
Protein GI115359140 
COG category[R] General function prediction only 
COG ID[COG3687] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.106904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA CCGCCGACTA TCACAAGATC AAGGCCCGGC ACGTGAAGTT CGACTTCAGC 
GACACGCCGA TCACGTGGGT GCCGAACGAC CCGTGCAGCA CGCACATCAT CAACACGCTG
AACCTGCTGT TCCCGGAAGG CGAGCTGTGG TTCTGCCGCG TATACAACAA GGCGCTGCCG
CACATCACCG ATGCACGCCT GCGCGACGAA GCCGAAGGCT TCCTGCGTCA GGAAGCCGTG
CATTCGCGCT CGCACGGCGG CGTGCTCAAG CATTACTACG ACCGGCACGG GATCGACACG
AAGCCGTTCA CGCGGAAGCT GAACTGGCTG TTCACGCGCG TGCTCGGCGA AGCGCCGCTC
GGACTGAAGA TCGGCCACAC GCGCTTCTGG CTGCGGCAAC AACTCGCGGT GATCGCGTCG
CTCGAACATT TCTTCGGCTA TCTCGGCAAC TGGGTACTCA ATGCGCACGG GCTCGACGAA
GGCGGCGCCG ACCCGACGAT GGTCGACCTG CTGCGCTGGC ACGGCGCGGA GGAAGTCGAG
CACCGCACCG TCGCGTTCGA CATCTACAAC CACGTGGGCG GCAACTACCC GGAGCGGTGC
CTGCACATGG CGTTCGTGAT CGTGCTGCTG CTCTACTTCA TCACGAGCGG CGCAAGATTC
ATGTACCGGC GCGACCCGGC CGCCGGCCGC TATCCGGGTT TCGTGCTGTC GTGGTGGAAG
GGTTCGCGGC GCGGCCACCT GCCGTCGTTC TGGAAAGTGA TCGGCGCGGC GCTGCGCTAT
TTCAAGCCGG GCTATACGCC GCACCATGAA GGTTCGACCG AGCAGGCGCT CGCGTATCTG
GCCCGCTCGC CCGCCGCGCA GGCGGCCGCG CACGGCGGCA ACTGGGGCAC GACGAAGGGC
GCGTGA
 
Protein sequence
MTATADYHKI KARHVKFDFS DTPITWVPND PCSTHIINTL NLLFPEGELW FCRVYNKALP 
HITDARLRDE AEGFLRQEAV HSRSHGGVLK HYYDRHGIDT KPFTRKLNWL FTRVLGEAPL
GLKIGHTRFW LRQQLAVIAS LEHFFGYLGN WVLNAHGLDE GGADPTMVDL LRWHGAEEVE
HRTVAFDIYN HVGGNYPERC LHMAFVIVLL LYFITSGARF MYRRDPAAGR YPGFVLSWWK
GSRRGHLPSF WKVIGAALRY FKPGYTPHHE GSTEQALAYL ARSPAAQAAA HGGNWGTTKG
A