Gene Bamb_4389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4389 
Symbol 
ID4313283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1327919 
End bp1329196 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content64% 
IMG OID638152229 
Productphosphoserine phosphatase 
Protein accessionYP_776275 
Protein GI115359137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.460917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.194055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCC GCCGGTTCAT GAACACCCTT GCCGCGGCGA CCGCCGCGAC GCCGCTCATG 
CTCAAGGCCG GCATCGCCGG CGCGAAGAGC GCAATCGCGC CGGACACGCT GGACCCGGGC
CGCTGGTCGC CGTTCAATGC CGCGCGCCTG CAGGCGGTGC TCGACCAGCA CGGCGTCGCG
AGCGCGCGCT ACGATGGAAA GCGCCGCCCG TATGCGGTGT TCGACTGGGA CAACACGTGC
ATCATGAACG ACTGCGAAGA GGCGTTGCTG ATGTACCAGA TCAACCATCT GCAGTACAAG
CTGACGCCGG ACGAGTTCGT CGGCGTGATG TGGAAGGACG TGCCGAAGGG CGCGTTCATG
AAGGACTACA CGACCATCGA TGGCAAGCCG GTGACGATGG AGGACCTCGC CGCCGACGTC
GAGTCCGACT ACCGCTGGCT CCATGCGAAC TACAAGGGCT TCGGCGGCGA CAAGAGCCTC
GACGAGATTC GCGAGACCGA CCAGTTCAAG GATTTTCGCG CGAAGCTGTA CTTCATGTAC
GACGCGATCT GCGACACGCA TCCGCTCGAA GTCGGCTACA AGTGGATCAT CTACTTCTAC
AAGAACATGA CGACCGCCGA GCTGCAGGCG ATGGCGGAAG CGTCGAACAA CTACGGTATC
GGCGACGCGC TGCGCAAGGT TCGCTACGAA AGCCCGAAGG CGCTGCCGGG CAAGGCCGAC
GTGGTGGCCG ATACCCATTT CCACGGCATC CGCATTCACG AGGAAATCCG CGCGGTGATG
CATACGCTGC GTGCGAACGG CATCGACGTG TACGTGAGCA CCGCGTCGCT CGACGACGTC
GTGCGCGTGT TCGCCGGCAA TCCGAACTAT GGCTACGGCG TGGCGCCCGA GAACGTGATC
GGCCTGCGTC TCGACATGCA GGACGGCAGG TACACGAGCA CCTATCCGGC CGGCTGGCAT
TTCAACTGGG GGCCCGGCAA GACGGTGGGC ATCCGCAACG TTCTCGCGTC GAAGAAGGGT
TACGGTCCGC TGCTGGTGTT CGGCGACAGC GACGGCGACG CGTGGATGCT GCGCGATTTC
AAGGACACCG CAGCCGGCGT GATCGTCAAC CGGATGAAGA AGGGCGAGAT CGGGGCGGAC
AGCAAACTCG CGGCCGAACA GATCGGCCAC CCGGACGCGC GCTTCCTGCT GCAGGGCCGC
GACGAGCACA CGGGCCTGAT GATCCCGGAC GAGAAGTCGA TCAAGTACGG CAAGACCGAG
CGCAAGCTGC TGGCCTGA
 
Protein sequence
MQRRRFMNTL AAATAATPLM LKAGIAGAKS AIAPDTLDPG RWSPFNAARL QAVLDQHGVA 
SARYDGKRRP YAVFDWDNTC IMNDCEEALL MYQINHLQYK LTPDEFVGVM WKDVPKGAFM
KDYTTIDGKP VTMEDLAADV ESDYRWLHAN YKGFGGDKSL DEIRETDQFK DFRAKLYFMY
DAICDTHPLE VGYKWIIYFY KNMTTAELQA MAEASNNYGI GDALRKVRYE SPKALPGKAD
VVADTHFHGI RIHEEIRAVM HTLRANGIDV YVSTASLDDV VRVFAGNPNY GYGVAPENVI
GLRLDMQDGR YTSTYPAGWH FNWGPGKTVG IRNVLASKKG YGPLLVFGDS DGDAWMLRDF
KDTAAGVIVN RMKKGEIGAD SKLAAEQIGH PDARFLLQGR DEHTGLMIPD EKSIKYGKTE
RKLLA