| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4388 |
|---|
| Symbol | |
|---|
| ID | 4313282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1327071 |
|---|
| End bp | 1327844 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638152228 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_776274 |
|---|
| Protein GI | 115359136 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.101759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGTT ACACGTTCGG CTTCAGCAGC GTCCTGATCG TCTTCGTCGT GGTGCTCGTC
GCGTCGTCGA TCCGCATCTT CCGCGAGTAC GAGCGTGGCG TCGTGTTCAT GCTCGGCCGG
TTCTGGAAAG TGAAGGGGCC GGGGCTCGTG CTGATCATCC CGATCGTCCA GCAGGTCGTG
CGGATCGACC TGCGCACCGT CGTGTTCGAC GTGCCGCCGC AGGACGTGAT CACGCGCGAC
AACGTGTCGG TGAAGGTCAA TGCGGTCGTG TATTTCCGCG TGGTCGATCC GGAGAAGGCC
GTGATCCAGG TCGCGCACTT CTTCGACGCG ACCAGCCAGC TCTCGCAGAC GACGCTGCGT
TCGGTGCTCG GCAAGCACGA GCTAGACGCA CTGCTCGCCG AGCGCGAGCA GCTGAACGCC
GACATCCAGA AGACGCTCGA CGCGCAGACC GATGCGTGGG GGATCAAGGT ATCGACGGTC
GAGATCAAGC ACGTCGACCT GAACGAGACG ATGGTGCGCG CGATCGCGCG GCAGGCCGAG
GCCGAGCGCG AGCGGCGCGC GAAGGTGATT CACGCGGAAG GCGAACTGCA GGCGTCGGAG
AAGCTGCTGC AGGCCGCGCA GCGGCTCGCG CTGCAGCCGC AGGCGATGCA GCTGCGCTAC
CTGCAGACAC TGACCACGAT CGCGGCCGAC AAGAATTCGA CGATCGTGTT TCCGCTGCCG
ATCGATCTGC TCGGGTCGCT GCTGGAGCGG CTGGGGGTGA AGCGGGAGCC TTGA
|
|---|
| Protein sequence | MIGYTFGFSS VLIVFVVVLV ASSIRIFREY ERGVVFMLGR FWKVKGPGLV LIIPIVQQVV
RIDLRTVVFD VPPQDVITRD NVSVKVNAVV YFRVVDPEKA VIQVAHFFDA TSQLSQTTLR
SVLGKHELDA LLAEREQLNA DIQKTLDAQT DAWGIKVSTV EIKHVDLNET MVRAIARQAE
AERERRAKVI HAEGELQASE KLLQAAQRLA LQPQAMQLRY LQTLTTIAAD KNSTIVFPLP
IDLLGSLLER LGVKREP
|
|---|
| |