| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4384 |
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| Symbol | |
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| ID | 4313278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1321178 |
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| End bp | 1322884 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152224 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_776270 |
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| Protein GI | 115359132 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.6529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0709193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAC AGGCATTCCT GGACGCACGC GACTTTCTGC TGCGCCATCG CACCGACTAC
GAAACCGCCT ACCGCGATTT CGAATGGCCG GTGCTCGATG CGTTCAACTG GGCGCTCGAC
TACTTCGACC CGATGGCGCG CGGCAACGAC CAGCCCGCGC TGTGGATCGT CGACGCGGCA
ACCGGGACGG GCGACCCGTA TTCGTTCGCG CAGATGTCCG AGCGCTCGTC GCGGATCGCG
AACTGGCTGC GCGGCATCGG CGTCGTGCGC GGCGACCGGA TCCTGCTGAT GTTGCCGAAC
CGTGTCGAGC TGTGGGACGC GATGCTCGCC GCGATGAAGC TCGGCGCGAT CGTGCTGCCC
GCGACCACGC AGCTGTCGGC CGACGACGTG CGCGACCGCG TGCAGATCGG CGGCGCGACC
TACGCAATCG TCGACGAGAA CGAAACCGCG AAGTTCGAAC AGGCCGATCT CGGCCTGAGG
CGCAAGATCG TCGCCGGCGC GCCGCGCGAC GGCTGGCTTG CGATGAACGA CGGCTACGCG
GCGAGCGACG TGTTCACCCC CGACGCCGTC ACGCAGTCGA ACGAAACGAT GCTGCTGTAC
TTCACGTCGG GCACGACGTC GAAGCCGAAG CTCGTCGAGC ATACGCACCG CACCTATCCG
GTCGGGCACC TGTCGACGAT GTACTGGGTC GGCCTGCAGC CCGGCGACAT CCACTGGAAC
ATCAGCTCGC CGGGCTGGGC GAAGCACGCG TGGAGCTGCT TCTTCGCGCC GTGGAATGCG
CAGGCGTGTG TGTTCGCGTT CAACTACGCG CGCTTCGAGC CGAAGGTCGT GCTCGATGCG
CTCGTCAAAT ACCGGGTGAC CACGCTGTGC GCGCCGCCGA CCGTGTGGCG GATGCTCGTG
CAGCAGCCGC TCGCGTCGTT CGACGTGAAG CTGCGCGAGA TCGTCGGCGC GGGCGAGCCG
CTCAATCCCG AGATCATCGA GCGCGTGAAG AAGGCGTGGG GCATCACGAT TCGCGACGGC
TACGGCCAGA CCGAGACGAC CTGCCTGATC GGCAACACGC CGGGCCAGCC GGTCGTCGCC
GGCTCGATGG GGCGGCCGCT GCCGGGCTAC CGGATCGCGC TGCTCGACCC GGACGGCGCG
CCCGTCAGCG AAGGTGAGGT CGCGCTGCCG ATCGGCGCCG GCGCGTCGCG CCCGGTCGGG
CTGATGAACG GCTACGCGAA CAATCCCGAC GCGACGGCCC ATGCGATGCG CGATGGCCAT
TACCGCACGT CGGACATCGC GATGCGCGGC GACGATGGCT ACTACGTGTA CATCGGCCGC
GCGGACGACG TGTTCAAGTC GTCCGACTAC CGGCTGAGCC CGTTCGAGCT GGAAAGCGTG
CTGATCGAGC ATCCGGCGAT CGCGGAGGCG GCCGTCGTGC CGAGCCCGGA CCCGGTGCGG
CTGTCGGTGC CGAAGACCTA CATCACGCTG CGCCAGGGCT ACGAGGAAAG CCCGGCGCTC
GCGCTGGAAA TCTTCCGCTT CTCGCGCGAG AAGCTCGCGC CGTACAAGCG CATCCGCCGC
CTGCAATTCG CCGAGCTGCC GAAGACCATC TCGGGGAAGA TCCGCCGCGT CGAGCTGCGC
CGCCGCGAGA TCGAGCGCGG CGACGATGCG ACGACGCGCA TGCCCGGCGA ATACTGGGAA
GAGGATTTCG CCGCCGAATT GAAATGA
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| Protein sequence | MTVQAFLDAR DFLLRHRTDY ETAYRDFEWP VLDAFNWALD YFDPMARGND QPALWIVDAA
TGTGDPYSFA QMSERSSRIA NWLRGIGVVR GDRILLMLPN RVELWDAMLA AMKLGAIVLP
ATTQLSADDV RDRVQIGGAT YAIVDENETA KFEQADLGLR RKIVAGAPRD GWLAMNDGYA
ASDVFTPDAV TQSNETMLLY FTSGTTSKPK LVEHTHRTYP VGHLSTMYWV GLQPGDIHWN
ISSPGWAKHA WSCFFAPWNA QACVFAFNYA RFEPKVVLDA LVKYRVTTLC APPTVWRMLV
QQPLASFDVK LREIVGAGEP LNPEIIERVK KAWGITIRDG YGQTETTCLI GNTPGQPVVA
GSMGRPLPGY RIALLDPDGA PVSEGEVALP IGAGASRPVG LMNGYANNPD ATAHAMRDGH
YRTSDIAMRG DDGYYVYIGR ADDVFKSSDY RLSPFELESV LIEHPAIAEA AVVPSPDPVR
LSVPKTYITL RQGYEESPAL ALEIFRFSRE KLAPYKRIRR LQFAELPKTI SGKIRRVELR
RREIERGDDA TTRMPGEYWE EDFAAELK
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