Gene Bamb_4380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4380 
Symbol 
ID4313274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1316696 
End bp1317835 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content69% 
IMG OID638152220 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_776266 
Protein GI115359128 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.12865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGGTCACGAC TCACGAACGC GTCGCGCAAT CCGCGCCGGA GGTGCTGTTC 
CGCGTGGTGA ACCGCGTGGC GCTGATCACG CTGAACCGGC CGGCCGCGCT CAATGCGTTG
TCCTATCCGA TGATCGGCGA GCTGGCCGCG CTGCTCGAGC GTTGCCGCAC CGACGACCAG
ATCGTCGCGG TCGTGCTGCG CGGGGCGGGC GAGAAGGGCT TCTGCGCGGG TGGCGACGTG
CGTGCGCTGT ACCGGATGGT CGCGCAGCGC GAGACCTGGC TGCCGTTCTT CGTCGACGAA
TACCGGCTCG ACCATGCGAT CCATACGTTT CCGAAACCGG TGGTCGCGCT GATGGACGGC
GTGACGATGG GCGGCGGGAT GGGGCTCGCG CAAGGCGCGG CGCTGCGTGT CGCGACCGAG
CGCAGCAAGA TCGCGATGCC GGAGACGCGC ATCGGCCTCG TGCCCGACGT CGGCGCGACG
CATTTCCTGT CGCGCATGCC GGTCGAACTC GAACTGTACG TGGGGCTGAC GGGCGCGATG
CTGTCGGGCG CCGACGCGCT GAGCGCGAAG CTCGCGGACC TGTGCGTGCC GTCGTCGTGG
CTCGATACGT TCGAGACGCG CATCGAGAGC GTCAAGTGGG ACGGCGATGT GCTGCCGGCG
CTGCGCAAGG TGTTCGAGCC GCCGTGCAAT GTCGTGCCGC ATGCCGTGCT CGACACACAG
ATGGCGTGGA TCGTCCGGCA CTTCGACAAG CGCTCGACCG TCGAGCGGAT CGTCGCGACG
CTGAAGCAGG ATCTCGCGCG CGACGAGCTG TCACGCGAGC ATCGTCAATG GCTGCAGGCG
ACGCTCGATG CGCTCGCCGG CCATTCGCCG ACGATGCTGT GCGTGACGCG CGAAGCGCTG
CTGCGCGGGC GCCAGATGAC GCTGGCCGAG TCGTTCCGGA TGGAGCTCGG CATCGTCGCG
CGCGCGATCG AGGAAGGCGA CTTCTGCGAA GGCGTGCGCG CGCATCTCAT CGACAAGGAT
CGCAAGCCGC GTTGGGCGCC GGCGTCGCTC GTCGAGCTGC GCGCCGAGCG CGTGCGGCAT
TTCCTGACCT CGCCGTGGAA GCTGTTCGCG CATCCGCTCG CCGATCTCGG CGCGGCGTGA
 
Protein sequence
MSTPVTTHER VAQSAPEVLF RVVNRVALIT LNRPAALNAL SYPMIGELAA LLERCRTDDQ 
IVAVVLRGAG EKGFCAGGDV RALYRMVAQR ETWLPFFVDE YRLDHAIHTF PKPVVALMDG
VTMGGGMGLA QGAALRVATE RSKIAMPETR IGLVPDVGAT HFLSRMPVEL ELYVGLTGAM
LSGADALSAK LADLCVPSSW LDTFETRIES VKWDGDVLPA LRKVFEPPCN VVPHAVLDTQ
MAWIVRHFDK RSTVERIVAT LKQDLARDEL SREHRQWLQA TLDALAGHSP TMLCVTREAL
LRGRQMTLAE SFRMELGIVA RAIEEGDFCE GVRAHLIDKD RKPRWAPASL VELRAERVRH
FLTSPWKLFA HPLADLGAA