Gene Bamb_4377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4377 
Symbol 
ID4313271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1313352 
End bp1313933 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID638152217 
Productmetal-dependent phosphohydrolase 
Protein accessionYP_776263 
Protein GI115359125 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.482271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0623525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG ACACGATCCA CGCGCGGCTC GATTTCCTGC GCGAAGCCGA ACGCCTGAAA 
GACGTGCTGC GCAGCGGCCA CACGTCGACG GGCCGCCGCG AAAGCACGGC GGAGCACAGC
TGGCGACTGT GCCTGATGGC GCTCGTGTTC GCCGATGCGC TGCCCGACGT CGACACGACG
AAGCTGCTGA AACTGTGCGT CGTCCACGAT CTCGGCGAAG CGCTGCACGG CGACATCCCC
GCGATCGAGC AGGCCGCGCA TCCGGACAAG AGCACGCATG AACGCGACGA CCTGCTGACG
CTCACGGCCG GGCTCGATCG CGCGCTGCGC GACGAGATCG TCGCGCTGTG GGACGAATAC
GAGGCGGCCG AATCACCGGA AGCGCGCGCC GCGAAGGCGC TCGACAAGCT CGAGACGATT
CTGCAGCACA ACCAGGGCAG CAATCCGCCC GACTTCGACT ACGCGTTCAA TCTCGGCTAC
GGGCGGCGCT ACACCGACGC GACGCCGCTG TTCGGCGCGA TCCGCGCGAT CGTCGACGCG
GACACACAAC GCAGGATCGA CGCACGCGGC GACGGCGCGT AA
 
Protein sequence
MNLDTIHARL DFLREAERLK DVLRSGHTST GRRESTAEHS WRLCLMALVF ADALPDVDTT 
KLLKLCVVHD LGEALHGDIP AIEQAAHPDK STHERDDLLT LTAGLDRALR DEIVALWDEY
EAAESPEARA AKALDKLETI LQHNQGSNPP DFDYAFNLGY GRRYTDATPL FGAIRAIVDA
DTQRRIDARG DGA