Gene Bamb_4373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4373 
Symbol 
ID4313267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1309288 
End bp1310019 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID638152213 
Productribonuclease T2 
Protein accessionYP_776259 
Protein GI115359121 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3719] Ribonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.010909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA CGCTCGCCCG CGCCGCGGCC GCACTCGCCG TCGCATCCGC CTCGCTGCAC 
GCAACCGCGC AGACCAGTTA CGACTACCTG TTGCTCGCGG CTTCGTGGGA GCCCGGCTTC
TGCGCGTCGC ACGATACGCC GGAGTGTACG AACCTCGCCG GCACGTATGC GGCGACGAGC
CTGTCGCTGC ATGGCCTGTG GCCGAACCGG TATGACGGCA ACCAGCCGTT CTACTGCGGC
GTGCCGCAGA GCGACATCGA TCTCGACAAT GCGCACCAGT GGTGCAGCAT GGATGCGTAT
CCGGTGAGCA CCGCGACCCG CAACACGCTG TCGACCTACA TGCCGGGCGT GGCGTCGTGC
CTCGACAAGC ACGAATGGTT CAAGCACGGC ACCTGCTCGA ATTCGGCCAC GCCGGACACT
TACTGGAACG AGGCGACCGG CATGATCAGC CGGCTCGGCA ACACGTCGTT CAACACGTTC
CTGCAGGCGA ACGCGGGCAA GGTGGTGACG CGCAATCAGT TGCTGTCCGC GTTCGAGGGC
GCGTTCGGCA GCAACACGCG CAGCGCGGTG TCGCTGAAGT GCACGAAGAC CAACGGCGTC
AGCTATTTCA CGGAAGCGTG GATCGCGGTC AAGACGACCG CGACTTCGCA GTTTCCGAGC
GCGGCATCGC TCGTGACGGA CGGCAATACG CAGGGCACGT GCCCGACGTC GGGCGTGTAT
ATCGCGAAGT AA
 
Protein sequence
MLKTLARAAA ALAVASASLH ATAQTSYDYL LLAASWEPGF CASHDTPECT NLAGTYAATS 
LSLHGLWPNR YDGNQPFYCG VPQSDIDLDN AHQWCSMDAY PVSTATRNTL STYMPGVASC
LDKHEWFKHG TCSNSATPDT YWNEATGMIS RLGNTSFNTF LQANAGKVVT RNQLLSAFEG
AFGSNTRSAV SLKCTKTNGV SYFTEAWIAV KTTATSQFPS AASLVTDGNT QGTCPTSGVY
IAK