Gene Bamb_4369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4369 
Symbol 
ID4313263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1305523 
End bp1306251 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID638152209 
Producttwo component transcriptional regulator 
Protein accessionYP_776255 
Protein GI115359117 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0241221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.010909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAC CGTTGCCCAT GTCTTTTCGC ATCCTGCTCG TCGAAGACGA CACCCGCCTG 
TCCACGCTGA TCGCCGGCTA CCTGCGCAAG AACGACTACG AAGTCGACAC TGTGCTGCAT
GGTGACGCCG CCGTGCCGGC GATCCTGTCC ATGCGCCCGG ATCTCGTCAT TCTCGACGTG
AACCTGCCGG GCAAGGACGG CTTCGAGATC TGCCGCGAAG CGCGCAAGGA GTACGACGGC
GTGATCATCA TGGTGACGGC GCGCGACGAG CCGTTCGACG AACTGCTCGG CCTCGAATTC
GGCGCCGACG ACTACGTGCA CAAGCCGGTC GAGCCGCGCA TCCTGCTCGC GCGGATCAAG
GCGCAGTTGC GCCGCGCCCC CGCGCGCGCG GCCCAGGGCC CCGCGGCGCA GCCGGAGCGC
TACACGTTCG GCCAGTTCTC GATCGACCGC ACCGACCGCT CGGTCGTGCT GCCCGGCGGC
GGCTCGCCCG ACCTCACGTC GGCGGAGTTC GACCTGCTGT GGGTGCTGGT GTGCCATGCG
GGAGAGGTCG TCAGCCGCGA CGACCTGATG CTGCAGCTGC GCGGTGTCGA GTTCGACGGC
CTCGACCGCA CGATCGACGG GCGCATCTCG AAGCTGCGCC GCAAGCTGCT TGACGATGCG
GGCAACCCGC AGCGGATCAA GACGATCCGC AGCAAGGGTT ACCAGTTCAG CAAGCATGCG
TGGGAATGA
 
Protein sequence
MIRPLPMSFR ILLVEDDTRL STLIAGYLRK NDYEVDTVLH GDAAVPAILS MRPDLVILDV 
NLPGKDGFEI CREARKEYDG VIIMVTARDE PFDELLGLEF GADDYVHKPV EPRILLARIK
AQLRRAPARA AQGPAAQPER YTFGQFSIDR TDRSVVLPGG GSPDLTSAEF DLLWVLVCHA
GEVVSRDDLM LQLRGVEFDG LDRTIDGRIS KLRRKLLDDA GNPQRIKTIR SKGYQFSKHA
WE