| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4367 |
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| Symbol | |
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| ID | 4313261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1301859 |
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| End bp | 1304249 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152207 |
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| Product | patatin |
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| Protein accession | YP_776253 |
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| Protein GI | 115359115 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.753572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0149161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGA CCGCTACTCT CCGCTGGCTC GGGGTGCGCC AGATCGGCGC AACGCTCGTT
GCGCTCTGGT GCAGCACCGT TGCCGCGCAG GCCTTGCCGG CCGCCGACAC CGCCACCCGC
ACCGCGCCGG TGGCCACTGC CGCCGCACCG GCCGCCCCCG CCGCGCCGAC CTGCAACGCC
GACGGCGGCC CGGCGGGCCG GCCGCCGGTC GGCCTCGTGC TGTCCGGCGG CGGCGCGCGC
GGCTACGCGC ACCTCGGCGT GCTGAAGGTG CTCGAGGAGA ACCGCATCCC GATCGACTGC
ATCGCCGGCA CCAGCATGGG CGCCGTGGTC GGCGGCCTGT ATGCGAGCGG CATGGCCGCC
GACGAGATGC AACAGCGGCT GTCCGAGGTG AACCTGGCCG ACATCGCCTT CGACGTGACC
GACCGCGCGG ACCTGCCGCA AACCAGCCGC GAGGACGAGC GCCTGTACAT CAACAGCCTG
ACGCTCGGCT TCGGCAAGAA AGGCGTGAAG GCGCCGGTCG GCCTCGTCCA GGGCAACCGG
CTGCAGGCGC TGCTCGCGAA CTGGACGGCC GCCGTGCCGA CCAACCAGCC GTTCGACCAG
CTCCCGATCC CGTATCGCGC GGTCGCGACC GACCTGCAGA CGGGCCAGAT GGTCGTGCTC
GACCACGGGT CGCTGCCGCT CGCGATCCGC GCGAGCATGG CGATGCCCGG CCTGTTCGCG
CCGGCCGAGA TCAACGGCCG CGCGCTCGTC GACGGCGGGC TCGTCAGCAA CCTGCCGGTC
GACACCGCGC GGCGCATGGG CGCGAAGGTC GTGATCGCCG TCGACATCGG CTCGCCGCTG
CGCCCGCTCG ACGCGCTCGC GTCGCCGGCC GACGTGATGC AGCAGATGGT CGGCATCCTG
ATCCGCCAGA ACGTGACGTC GCAGCGCCAG CAGCTCGCCG CACAGGACGT GCTGCTCACG
CCCGACCTCG GCGCGCTCGC GTTCACCGAT TTCCAGAACG CGAAGCAGGC GATCGCCGCC
GGCGCGGCCG CCGCGACCGC GGCGCTGCCG CGGCTCAAGC GCTTCGCGCT CACGCCGGAA
CAGTACGCGG CCTACCGGTC CGCCCATGCG CAGCCGCTGC CGCCGCCGAT CCGCATCACG
CGCATCGAGA TCAAGACGAG CGGCGGCATC CCCAAGCGGG TCGTCAGCGA CGCGCTGCAC
GTCAAACCGG GCGACACCTA CGATCCGGCG ACCGTCAGCC AGGACCTGCT CGGGCTGACG
ACCGGCGGCA ATTTCGAGAG CGTGACGCAG CAGATCGTGA GCCACGGCGA CGAGAACGTG
CTCGTGGTCG ATGCGCGCGA GAAATACTGG GGGCCGAATT TCCTGCTGTT CGGCGTCGGG
ATGTCGAGCA GTTCGACCGA CGAAGGCGGC TTCCGCCTGC ACGTCGGCTA CCGGCGGCCG
TGGCTCACCG AATCGGGGCT CGAATTCCGC GCGGATACGA CGATCGGCAG CGACCTGCTG
TCGGGGCGCG TCGAATTGCG CCAGCCATTG CCGGCCGCGT ACGGTTTCTA TATTTCGCCC
TATGCGGAAT ATCAGCGTCG CTACGTGAAC CTGTACGACG ACAGCGGCGA GGTCAAACTG
AACCAGTATC TGATGCAGAC GGCACGCACC GGGATCGACT TCGGGCTGCC GATCGGCCGG
CTCGGCGACC TCCGGATGGG CATCGGCTAC GCGACCGGGC ACGGCTCGCC GAACTACAAC
CTGCCGTTCT CGCAGGATGA CGGCAGCTCG AGCCTGATCT GGCCGAGCTT CACGTCGCAG
GCGCTGACCG CGCGCGCGCG GCTCGTCATC GATCAGCTCG ACGATCCGAT GTTCCCGCGC
CGCGGCTACT ACAGCGAATT CCGCGTCGAA CGCTCGCTGT GGTCGCACAA CAGCCAGTCC
GCGGCGAACC TCGCCGATAC GTCGAACACG CCTTACACCG AGATCTACGG CAAGGCGATG
ATCGCGCAGC AGTTCGGCCG GCACAGTGTC AGCGCCACGA TCGAGGGCGG CAAGAGCATC
GGCGGGACCA ACCTGATCAA CGCGTTCAAC TTCACGCTCG GCGGCTTCCA GCATCTGGCC
GCGTATGCGG CCGACCAGTT GACCGGCAAC GAACTCGCGT ACGCGAACGT GACTTACATG
AACCAGCTGG CGACGTTCAA CGCGTCGCCG ATCAAGGCGC TGTCGGTGGG CGCCAGCGCG
GAAGTCGGCA ACGTGTGGTC GAGCGGCGTG CAGGTGGGCG GCGGCGCGCT CAAGCAGAGC
TATACGTTCT TCACGAGCCT GTCGACCGCG TTCGGTCCGC TGTACATGGG TGTCGCGCTC
GCGCCGGGCG GGCGGCGCAA CATCTATCTG CAGCTCGGCC GCACGTATTG A
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| Protein sequence | MTATATLRWL GVRQIGATLV ALWCSTVAAQ ALPAADTATR TAPVATAAAP AAPAAPTCNA
DGGPAGRPPV GLVLSGGGAR GYAHLGVLKV LEENRIPIDC IAGTSMGAVV GGLYASGMAA
DEMQQRLSEV NLADIAFDVT DRADLPQTSR EDERLYINSL TLGFGKKGVK APVGLVQGNR
LQALLANWTA AVPTNQPFDQ LPIPYRAVAT DLQTGQMVVL DHGSLPLAIR ASMAMPGLFA
PAEINGRALV DGGLVSNLPV DTARRMGAKV VIAVDIGSPL RPLDALASPA DVMQQMVGIL
IRQNVTSQRQ QLAAQDVLLT PDLGALAFTD FQNAKQAIAA GAAAATAALP RLKRFALTPE
QYAAYRSAHA QPLPPPIRIT RIEIKTSGGI PKRVVSDALH VKPGDTYDPA TVSQDLLGLT
TGGNFESVTQ QIVSHGDENV LVVDAREKYW GPNFLLFGVG MSSSSTDEGG FRLHVGYRRP
WLTESGLEFR ADTTIGSDLL SGRVELRQPL PAAYGFYISP YAEYQRRYVN LYDDSGEVKL
NQYLMQTART GIDFGLPIGR LGDLRMGIGY ATGHGSPNYN LPFSQDDGSS SLIWPSFTSQ
ALTARARLVI DQLDDPMFPR RGYYSEFRVE RSLWSHNSQS AANLADTSNT PYTEIYGKAM
IAQQFGRHSV SATIEGGKSI GGTNLINAFN FTLGGFQHLA AYAADQLTGN ELAYANVTYM
NQLATFNASP IKALSVGASA EVGNVWSSGV QVGGGALKQS YTFFTSLSTA FGPLYMGVAL
APGGRRNIYL QLGRTY
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